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The map label for this gene is insD1 [C]

Identifier: 82543698

GI number: 82543698

Start: 1179280

End: 1179759

Strand: Direct

Name: insD1 [C]

Synonym: SBO_1182

Alternate gene names: 82543698

Gene position: 1179280-1179759 (Clockwise)

Preceding gene: 82543697

Following gene: 82543699

Centisome position: 26.09

GC content: 53.96

Gene sequence:

>480_bases
GTGATAACTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTGACTACCGGCGGCTTCAACAG
TGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGC
TGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACG
GCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCC
CAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGC
TGGGTTATCGCTCACCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG

Upstream 100 bases:

>100_bases
CGAAAGCCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTC
TGACGGGTTCGAGTTCTGCT

Downstream 100 bases:

>100_bases
GGGCAAATCCATGATTGTCTGCGTGAAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGT
TTTACGCGTATGACAGGATA

Product: IS2 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MITVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNT
AVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

Sequences:

>Translated_159_residues
MITVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNT
AVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>Mature_159_residues
MITVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNT
AVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=158, Percent_Identity=98.7341772151899, Blast_Score=330, Evalue=2e-92,
Organism=Escherichia coli, GI1789424, Length=158, Percent_Identity=98.7341772151899, Blast_Score=330, Evalue=2e-92,
Organism=Escherichia coli, GI1789224, Length=158, Percent_Identity=98.7341772151899, Blast_Score=330, Evalue=2e-92,
Organism=Escherichia coli, GI1788305, Length=158, Percent_Identity=98.7341772151899, Blast_Score=330, Evalue=2e-92,
Organism=Escherichia coli, GI1787669, Length=158, Percent_Identity=98.7341772151899, Blast_Score=330, Evalue=2e-92,
Organism=Escherichia coli, GI1786558, Length=158, Percent_Identity=98.7341772151899, Blast_Score=330, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 17915; Mature: 17915

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSC
CEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCE
YRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAE
EECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECC
>Mature Secondary Structure
MITVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSC
CEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCE
YRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAE
EECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA