| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543501
Identifier: 82543501
GI number: 82543501
Start: 988643
End: 989116
Strand: Reverse
Name: 82543501
Synonym: SBO_0957
Alternate gene names: NA
Gene position: 989116-988643 (Counterclockwise)
Preceding gene: 82543502
Following gene: 82543500
Centisome position: 21.88
GC content: 46.2
Gene sequence:
>474_bases GTGGCGATAGCGTTAAAAAATATTCAGGCCGGAAATGCTAAAAAATTCACGTTATCCAGCGCCAACAACTCCACGAAAAA TGCAGCGTTTTATTTGTGGGGTAATCCATCCAGGCCTGTTGTTGCAGAGCTTGGTGATGATTCCGGCTGGCATTTCTACA GCCAGAGAAATACCGATGGTAGTATCACATTCGCTGTAAACGGACAGGTAATTCCGTTAAATTACGGAAACTTCGATGCC CGCTATAAACATCGAACTGAGGGGGTACAGGATGTGCGGTATGGTTATGAAATGTATTACAACCCTGGCAGCAACACCGT TTCATGGACGTTTCGCTCACCTTCGGGACACGGGTTGTCAGGGATATCGATATCGGATACCGGCCGTAACTCAGCGGATA ACGTCAACGGTGTGTATTACCGACCGCTGCAAAAACTGATTAATGGCATCTGGTATAACGTAGCGAGTATTTAA
Upstream 100 bases:
>100_bases AATTGCTTTCGGGGATAACGATACAGGTATAAAACAAAACGGCGACGGCATTCTGGATGTTTATGCGAATGGACAGCATG TATTTCGTTTCCAGAATGGT
Downstream 100 bases:
>100_bases CAATGTTGCATTTAAAAAATATTACGGCAGGTAATCCGAAAACCGCGGAACAATATCAGCTGACAAAACAGTATGATGTC ACCTGGCTTTTTTCGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Side Tail Fiber Protein; Bacteriophage Tail Protein; Phage Tail Fiber Protein; Tail Fiber Protein-Like Protein; Phage Tail-Like Protein; Tail Fiber; Tail Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDA RYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI
Sequences:
>Translated_157_residues MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDA RYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI >Mature_156_residues AIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDAR YKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI
Specific function: Unknown
COG id: COG5301
COG function: function code R; Phage-related tail fibre protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17372; Mature: 17241
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDG CEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCC SITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLS EEEEEECCEEEEEECCCCCCCEEECCCCHHHHCCCEEEEECCCCCEEEEEEECCCCCCCC GISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI CEEECCCCCCCCCCCCCEEEHHHHHHHHHHHEEECCC >Mature Secondary Structure AIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAELGDDSGWHFYSQRNTDG EEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCC SITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLS EEEEEECCEEEEEECCCCCCCEEECCCCHHHHCCCEEEEECCCCCEEEEEEECCCCCCCC GISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI CEEECCCCCCCCCCCCCEEEHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA