| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is 82543500
Identifier: 82543500
GI number: 82543500
Start: 988095
End: 988640
Strand: Reverse
Name: 82543500
Synonym: SBO_0956
Alternate gene names: NA
Gene position: 988640-988095 (Counterclockwise)
Preceding gene: 82543501
Following gene: 82543499
Centisome position: 21.87
GC content: 49.27
Gene sequence:
>546_bases ATGTTGCATTTAAAAAATATTACGGCAGGTAATCCGAAAACCGCGGAACAATATCAGCTGACAAAACAGTATGATGTCAC CTGGCTTTTTTCGGAAGACGGCAAAAACTGGTATGAAGAACAGAAGAACTTTGCCAGTGACACCATAAAAATGGTTTACA CCGGAGACGGGCGCGTGGTGTGGGTCGGTAAGGATGTGACAGGCATTGAACCCCGTAACGCCAGTGTTATTGAAGTTCCT GATATTACCGCCAACCGCCGCATTACCGCGCCGGGTTACTGGTTTTACCGCAATGATGAATTTGTCTTTGACTACAGACT CAAAGCGGAAGATGAGCGTGATGCCCTTCTGGCTCAGGTCAGTGCCCGGACAGGGGAATGGGAAGAAGACCTGCTGCTGG GGCTAATCAGCGACGAAGACCGGGAAAAACTGAAAGCGTACCGTATTTACGCGAAATCGCTGCAGGCGATGGATTTCAGC GCCATCACTGATAAATCCTCATACAACGCCATTGAATGGCCCGTCTCTCCGGAAGGTTCTTCCTGA
Upstream 100 bases:
>100_bases ATACCGGCCGTAACTCAGCGGATAACGTCAACGGTGTGTATTACCGACCGCTGCAAAAACTGATTAATGGCATCTGGTAT AACGTAGCGAGTATTTAACA
Downstream 100 bases:
>100_bases TTTAATTTATCGCGAGAAAAACTATGTCTGTAGTGATATCAGGTGCGCTGACTGATGGCGCAGGCATCCCCATGTCCGGA TGCCAGATTATTCTGAAATC
Product: tail fiber assembly protein
Products: NA
Alternate protein names: Phage Tail Fiber Assembly Protein; Bacteriophage Tail Protein; Tail Assembly Chaperone Gp; Phage Gene; Tail Fiber Assembly Protein GpG; Phage Tail Fibre Assembly Protein
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLHLKNITAGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVVWVGKDVTGIEPRNASVIEVP DITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFS AITDKSSYNAIEWPVSPEGSS
Sequences:
>Translated_181_residues MLHLKNITAGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVVWVGKDVTGIEPRNASVIEVP DITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFS AITDKSSYNAIEWPVSPEGSS >Mature_181_residues MLHLKNITAGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVVWVGKDVTGIEPRNASVIEVP DITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFS AITDKSSYNAIEWPVSPEGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20824; Mature: 20824
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHLKNITAGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVV CEEECCCCCCCCCCHHHEEEEEEEEEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCEEE WVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQV EEECCCCCCCCCCCCEEECCCCCCCCEEECCCEEEEECCCEEEEEEECCCCCHHHHHHHH SARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSAITDKSSYNAIEWPVSPEGS HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCC S C >Mature Secondary Structure MLHLKNITAGNPKTAEQYQLTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVV CEEECCCCCCCCCCHHHEEEEEEEEEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCEEE WVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQV EEECCCCCCCCCCCCEEECCCCCCCCEEECCCEEEEECCCEEEEEEECCCCCHHHHHHHH SARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSAITDKSSYNAIEWPVSPEGS HCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA