| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yehP [H]
Identifier: 82543488
GI number: 82543488
Start: 975540
End: 976676
Strand: Direct
Name: yehP [H]
Synonym: SBO_0944
Alternate gene names: 82543488
Gene position: 975540-976676 (Clockwise)
Preceding gene: 82543487
Following gene: 82543489
Centisome position: 21.58
GC content: 54.35
Gene sequence:
>1137_bases ATGTCTGAACTGAACGATCTTCTGACCACCCGTGAGCTACAACGCTGGCGATTAATTCTTGGCGAAGCGGCAGAAACGAC GCTTTGTGGGCTGGATGACAACGCCCGGCAGATAGATCACGCGCTGGAGTGGCTGTATGGGCGCGATCCTGAACGGCTCC AGCGTGGTGAACGCTCTGGTGGATTAGGTGGCTCAAATCTCACCACTCCTGAGTGGTTCAACAGTATCCACACGCTGTTT CCGCAACAGGTGATTGAGCGGCTGGAAAGCGATGCCGTACTGCGCTACGGCATTGAAGATGTGGTGACAAATCTCGACGT GCTGGAACGTATGCAGCCTTCCGAAAGCCTGCTACGCGCCGTTTTGCACACCAAACATCTGATGAACCCCGAAGTACTGG CTGCCGCCCGCAGGATTGTGCGCCAGGTTGTTGAAGAAATTATGGCGCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCT GGTGTCCGCGATCGCCGTCGCCGCTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACTCTGCGCGCCAACCT GCAACACTGGCACCCGCAACACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAAC AATGGCAACTGGTCTTACTGGTTGATCAAAGCGGCTCGATGGTCGATTCGGTGATCCCCTCTGCGGTGATGGCGGCCTGT TTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGA TCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTA TTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAG GTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACAGCAACACCTTGCTATGACCG CGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACACCGGGCGAGCTGGCATCATGGCTTGCGG AGAATCTTCAGTCATGA
Upstream 100 bases:
>100_bases GCACTGCAAATGCCGTTGCATTGTCCACCGCAAGCCATTGCACATCATCAACAACTCGAACAGCAGGCACTGGCATCGCT GCAACACTGGGGAGTTTTCC
Downstream 100 bases:
>100_bases ATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAGT CTTAAGGAACTGGAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWFNSIHTLF PQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFS GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIPSAVMAAC LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQ VKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS
Sequences:
>Translated_378_residues MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWFNSIHTLF PQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFS GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIPSAVMAAC LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQ VKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS >Mature_377_residues SELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWFNSIHTLFP QQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFSG VRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIPSAVMAACL WQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQV KKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788440, Length=378, Percent_Identity=99.2063492063492, Blast_Score=764, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008912 - InterPro: IPR002035 [H]
Pfam domain/function: PF05762 VWA_CoxE [H]
EC number: NA
Molecular weight: Translated: 42167; Mature: 42036
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSG CCHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCC GLGGSNLTTPEWFNSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCCCHHHHHHH VLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHH STLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIPSAVMAAC HHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKS HHHCCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQI EEEEEEHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE AAMTPGELASWLAENLQS EECCHHHHHHHHHHHHCC >Mature Secondary Structure SELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSG CHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCC GLGGSNLTTPEWFNSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCCCHHHHHHH VLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHH STLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIPSAVMAAC HHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKS HHHCCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQI EEEEEEHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE AAMTPGELASWLAENLQS EECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]