| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yegP [H]
Identifier: 82543454
GI number: 82543454
Start: 935519
End: 935890
Strand: Direct
Name: yegP [H]
Synonym: SBO_0906
Alternate gene names: 82543454
Gene position: 935519-935890 (Clockwise)
Preceding gene: 82543453
Following gene: 82543455
Centisome position: 20.7
GC content: 47.04
Gene sequence:
>372_bases ATGCTGTTTTCGATACGCAATTTCAATCAAGGAGTCATTATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCA GTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTGTATACATCAAAAGCCTCTGCGGAAA AGGGCATCGCGTCAGTGCGTAGCAACAGCCCGCAAGAAGAACGCTATGAGAAAAAAACGGCAAGTAACGGCAAATTCTAT TTCAATCTGAAAGCCGCCAATCATCAAATTATCGGCTCCAGCCAGATGTACGCCACCGCGCAATCTCGTGAAACCGGAAT TGCCTCCGTTAAAGCCAATGGCACAAGCCAGACGGTGAAAGACAATACGTAA
Upstream 100 bases:
>100_bases CAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAA TCGGTAAACAGCACCTTTAG
Downstream 100 bases:
>100_bases TTACGATGCCGGGCGTGGGTTGTTGGCGTCCGGCTTTATTTTCTCTCATCACAGAGTTACTATCCCTCAAGAAATTATTA ACCATGAAATGAGTTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLFSIRNFNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVRSNSPQEERYEKKTASNGKFY FNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT
Sequences:
>Translated_123_residues MLFSIRNFNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVRSNSPQEERYEKKTASNGKFY FNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT >Mature_123_residues MLFSIRNFNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVRSNSPQEERYEKKTASNGKFY FNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family. Duplicated subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082037, Length=110, Percent_Identity=99.0909090909091, Blast_Score=222, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010879 [H]
Pfam domain/function: PF07411 DUF1508 [H]
EC number: NA
Molecular weight: Translated: 13515; Mature: 13515
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSIRNFNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVR CEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEHHHCCCCCHHHHHHHHC SNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVK CCCCHHHHHHHHCCCCCEEEEEEECCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCCC DNT CCC >Mature Secondary Structure MLFSIRNFNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVR CEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEHHHCCCCCHHHHHHHHC SNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVK CCCCHHHHHHHHCCCCCEEEEEEECCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCCC DNT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]