| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82543455
Identifier: 82543455
GI number: 82543455
Start: 936067
End: 937413
Strand: Direct
Name: 82543455
Synonym: SBO_0907
Alternate gene names: NA
Gene position: 936067-937413 (Clockwise)
Preceding gene: 82543454
Following gene: 82543456
Centisome position: 20.71
GC content: 44.91
Gene sequence:
>1347_bases ATGAATAATTCTGTTGACTGTGAATTACTTCTCATCCAGCAACAACTCCAGGCATTGATAGCCGAACCAGGCAATTATTT AGCACATGATTGTGATCTCAACGATACTCTGGTTCTTTGCCAGCTTACCCATCATCACAATGGATATATACGAGAAAAGG CCGTGCAGTATCTGGGGCACAAAGAGGATGTTGCGGCTATAGAAGAATTATTACTTGCAGCTAATGACTGGGTAAAAGAG GTTCGCCTTGCTGCAACCATAGCATTACGTCATTTAATGAAGGATAAGAATGCAGCGGCATTTGCCGTTAATCTACCCAT GATACGTAACCTTCTCCAATGCCAGCGTTACGATCACCGTGCATTTGTAGACGAGATACTTAGATATTTATTGACAGAAA ATAACCGCCCACAATTAACGTATTGGCTTACTTGCCCTGATAAAAAGCTCTCCCGCGCGGTATTACAAACGCTGATTGAA TACGGTTACTTTAATGATGAATCTTCACTGCTTTCAATACTCGATAAACCCGATGAGGGTTTGCGAATGCTGGCGACCAC CCACTGGCTGCGTCAACAATTACCATTAAGCGAAGCGGTATTAACTCGTCTGTTAAAAGACCGCTGGCCGCGTATTCGAC AAGCAACGTTATTTAGCCTCACTGACCGAGCAATAGAAATGCCTCCGGCGTTGCACAGCACATTACTGCTGGATAACAAT ATGTTGATCCGCCTACGCGCTAAAAATATGCTTCACGAAGTCATGGATGTTCCGCAATTCTGGCGTCATGTTGTCACTTC TGCGGAATATACTCCCTCACAGCGACGGGCCGCTTTATACGGGCTGGATTCCATTCATGATCCCAATATTTTAAAACTGG CAGAATGGGGATTATCACAGAATGTATTCCCACTGCGTTTAGCCGCTATGCACATTCTTGCAAAAGCTAATCCTCGTTGT GGCGTCAAAGAGACTATTCTGACCACGCTGGCTAACCCGGACGCCGCCGGGTTGCGATTTATGGTTAACATCTGTGTATG GTGTCGCGTTCCGCTCACGTTCGAGGAAATACGTCAGTTGCAGGAAAACGCGCCGTCAGTTAAACATGCTTGCGCATATT GTCGGCTGTATCATAACTTGAACAAATGGGACGGTTTAATTCTTCTTCTTCAATCGCAACACAAGCTAACTGAAGAATTT GCAGGTAAACAGCTCGCGATATGGCAACGCAATTTCAATCTTTCGGGCATTCAACCGAATGCTCTTCAGCGTCAGCAACT TCAGGCGCTTTTTACCCGCAATCCGGAACTTCACAACAGATTATGGGGTTACATTCCTTTTAAATAA
Upstream 100 bases:
>100_bases ATTAACCATGAAATGAGTTTTCTCCTCATAACTGATAAGGAAAATTATGCTCAAAGGATTGCGTACATTATTTTCACGCA GGGTTTTGTTTAACGTCGAA
Downstream 100 bases:
>100_bases CTTCGAATTATAGACTTACGATGACAAATGTACCTGCTGACGAGCGGAACCAAAACGAAACAATACGTGAAGCTTTACGC TTGCTACGAGAAAAACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNNSVDCELLLIQQQLQALIAEPGNYLAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKE VRLAATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYWLTCPDKKLSRAVLQTLIE YGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAVLTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNN MLIRLRAKNMLHEVMDVPQFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKANPRC GVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYCRLYHNLNKWDGLILLLQSQHKLTEEF AGKQLAIWQRNFNLSGIQPNALQRQQLQALFTRNPELHNRLWGYIPFK
Sequences:
>Translated_448_residues MNNSVDCELLLIQQQLQALIAEPGNYLAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKE VRLAATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYWLTCPDKKLSRAVLQTLIE YGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAVLTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNN MLIRLRAKNMLHEVMDVPQFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKANPRC GVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYCRLYHNLNKWDGLILLLQSQHKLTEEF AGKQLAIWQRNFNLSGIQPNALQRQQLQALFTRNPELHNRLWGYIPFK >Mature_448_residues MNNSVDCELLLIQQQLQALIAEPGNYLAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKE VRLAATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYWLTCPDKKLSRAVLQTLIE YGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAVLTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNN MLIRLRAKNMLHEVMDVPQFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKANPRC GVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYCRLYHNLNKWDGLILLLQSQHKLTEEF AGKQLAIWQRNFNLSGIQPNALQRQQLQALFTRNPELHNRLWGYIPFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51749; Mature: 51749
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSVDCELLLIQQQLQALIAEPGNYLAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGH CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHCC KEDVAAIEELLLAANDWVKEVRLAATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCHH AFVDEILRYLLTENNRPQLTYWLTCPDKKLSRAVLQTLIEYGYFNDESSLLSILDKPDEG HHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHH LRMLATTHWLRQQLPLSEAVLTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNN HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEECCC MLIRLRAKNMLHEVMDVPQFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQ EEEEEHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCC NVFPLRLAAMHILAKANPRCGVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQL CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH QENAPSVKHACAYCRLYHNLNKWDGLILLLQSQHKLTEEFAGKQLAIWQRNFNLSGIQPN HHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCC ALQRQQLQALFTRNPELHNRLWGYIPFK HHHHHHHHHHHHCCCHHHHCCCCCCCCC >Mature Secondary Structure MNNSVDCELLLIQQQLQALIAEPGNYLAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGH CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHCC KEDVAAIEELLLAANDWVKEVRLAATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCHH AFVDEILRYLLTENNRPQLTYWLTCPDKKLSRAVLQTLIEYGYFNDESSLLSILDKPDEG HHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHH LRMLATTHWLRQQLPLSEAVLTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNN HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEECCC MLIRLRAKNMLHEVMDVPQFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQ EEEEEHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCC NVFPLRLAAMHILAKANPRCGVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQL CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH QENAPSVKHACAYCRLYHNLNKWDGLILLLQSQHKLTEEFAGKQLAIWQRNFNLSGIQPN HHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCC ALQRQQLQALFTRNPELHNRLWGYIPFK HHHHHHHHHHHHCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA