| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is wbdG
Identifier: 82543412
GI number: 82543412
Start: 875931
End: 876941
Strand: Reverse
Name: wbdG
Synonym: SBO_0861
Alternate gene names: NA
Gene position: 876941-875931 (Counterclockwise)
Preceding gene: 82543413
Following gene: 82543411
Centisome position: 19.4
GC content: 29.87
Gene sequence:
>1011_bases TTGGCATCTGTTGGATGGCAGATTGATTTTATTTATTTGACGAACCGTATTGTTTGTTATAATCGATTTTCTGGCCTTGT GGGTAAAATAAAAGCAAAATTATTTTCATTATTAAAGTTCTACAAATGGTTTGATTTTACATCCTCTAATATAAATCATT ATGTGATTAAATCTCTAAAAAAAAGAGATATCGAAAATTTTAATATTGTCATTTGCTCCTCTGTTGAGACGTTTATATAC GCCAATTCGTCATGTAGAGTTAACCATAAAAAATTAGTATATTTTGTACAGGATTATGAAAACTGGAATATTCCTGAGAA TATTTTAAACTATACACTTTCACATAAAGATGTTGATTATATAACTATTTCTGATGACTTGGTGAAAAAGATTACAAAAA TGGGAGGGGATGTTTCTCTCACCTTGTACAATGGAATAAACAAAAATGATTTTTTTGTTAACATTCCATGGAATGAAAGG GATAGAGCTTCATTTTTATTTCTATATCATCCTAGTGAAAGAAAGGGTTGTGATCTCTTATTAAGAGCAATACAAAAAAT TCACGAAGTTGATAGCTCAATTAAATTCAGTTGCTTTAGTGCTTATACAAAACCAGAAAATTTCCCTTCGTTTATTCATT ACGTATATCAACCCACAGTTAAACAGCTAAATAATTTATATAATGAGAATAGATACTTCATTTGCAGTAGTATATATGAA GGATTTGGTTTGACTGCAGCAGAGGCATCTTTTAGTGGGGCAATAGTAGTTACAACGAGAAATGGTGGCGTAGAACAATT TATCAAAAATGAAGTGACTGGCTTTGTTCTCAAGGAAAGAACGCTAAATTCCTTCATGGTTGCTATTATGAAGCTTTCAC AAAAGGATGAAGAACTAAATCTTTTTGCTATTGAAAGTAGTAAAAAAGTCAGAATACAACTAGATCTCGATATAAATTTC AAGAAAATTGATAGTTACTTTAAGGCTAGATATAATAACAAGAGGAATTAA
Upstream 100 bases:
>100_bases TAAATTTAAGGTCTAAATGAAAAAAATAGCTATTTTACTACCAGGACCAAGAAGGGAGCCTGTTGGTGGATATAAAGTCT TGTATCAATATGGAAACTAT
Downstream 100 bases:
>100_bases TTTATGCTAGCTTGGGCACCAAAGTTGTTATTGCTGTTTTTTTTATTGTCTGGATTAATTAAGGCTATATCATTGTATAT AAATATTAATCTTAATTATG
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MASVGWQIDFIYLTNRIVCYNRFSGLVGKIKAKLFSLLKFYKWFDFTSSNINHYVIKSLKKRDIENFNIVICSSVETFIY ANSSCRVNHKKLVYFVQDYENWNIPENILNYTLSHKDVDYITISDDLVKKITKMGGDVSLTLYNGINKNDFFVNIPWNER DRASFLFLYHPSERKGCDLLLRAIQKIHEVDSSIKFSCFSAYTKPENFPSFIHYVYQPTVKQLNNLYNENRYFICSSIYE GFGLTAAEASFSGAIVVTTRNGGVEQFIKNEVTGFVLKERTLNSFMVAIMKLSQKDEELNLFAIESSKKVRIQLDLDINF KKIDSYFKARYNNKRN
Sequences:
>Translated_336_residues MASVGWQIDFIYLTNRIVCYNRFSGLVGKIKAKLFSLLKFYKWFDFTSSNINHYVIKSLKKRDIENFNIVICSSVETFIY ANSSCRVNHKKLVYFVQDYENWNIPENILNYTLSHKDVDYITISDDLVKKITKMGGDVSLTLYNGINKNDFFVNIPWNER DRASFLFLYHPSERKGCDLLLRAIQKIHEVDSSIKFSCFSAYTKPENFPSFIHYVYQPTVKQLNNLYNENRYFICSSIYE GFGLTAAEASFSGAIVVTTRNGGVEQFIKNEVTGFVLKERTLNSFMVAIMKLSQKDEELNLFAIESSKKVRIQLDLDINF KKIDSYFKARYNNKRN >Mature_335_residues ASVGWQIDFIYLTNRIVCYNRFSGLVGKIKAKLFSLLKFYKWFDFTSSNINHYVIKSLKKRDIENFNIVICSSVETFIYA NSSCRVNHKKLVYFVQDYENWNIPENILNYTLSHKDVDYITISDDLVKKITKMGGDVSLTLYNGINKNDFFVNIPWNERD RASFLFLYHPSERKGCDLLLRAIQKIHEVDSSIKFSCFSAYTKPENFPSFIHYVYQPTVKQLNNLYNENRYFICSSIYEG FGLTAAEASFSGAIVVTTRNGGVEQFIKNEVTGFVLKERTLNSFMVAIMKLSQKDEELNLFAIESSKKVRIQLDLDINFK KIDSYFKARYNNKRN
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 39207; Mature: 39076
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVGWQIDFIYLTNRIVCYNRFSGLVGKIKAKLFSLLKFYKWFDFTSSNINHYVIKSLK CCCCCEEEEEEEEECEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH KRDIENFNIVICSSVETFIYANSSCRVNHKKLVYFVQDYENWNIPENILNYTLSHKDVDY HCCCCCCEEEEEECCEEEEEECCCCEECCEEEEEEEEECCCCCCCHHHHHHEECCCCCEE ITISDDLVKKITKMGGDVSLTLYNGINKNDFFVNIPWNERDRASFLFLYHPSERKGCDLL EEECHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHH LRAIQKIHEVDSSIKFSCFSAYTKPENFPSFIHYVYQPTVKQLNNLYNENRYFICSSIYE HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCEEEEEHHHC GFGLTAAEASFSGAIVVTTRNGGVEQFIKNEVTGFVLKERTLNSFMVAIMKLSQKDEELN CCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCEE LFAIESSKKVRIQLDLDINFKKIDSYFKARYNNKRN EEEEECCCEEEEEEEECCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASVGWQIDFIYLTNRIVCYNRFSGLVGKIKAKLFSLLKFYKWFDFTSSNINHYVIKSLK CCCCEEEEEEEEECEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH KRDIENFNIVICSSVETFIYANSSCRVNHKKLVYFVQDYENWNIPENILNYTLSHKDVDY HCCCCCCEEEEEECCEEEEEECCCCEECCEEEEEEEEECCCCCCCHHHHHHEECCCCCEE ITISDDLVKKITKMGGDVSLTLYNGINKNDFFVNIPWNERDRASFLFLYHPSERKGCDLL EEECHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHH LRAIQKIHEVDSSIKFSCFSAYTKPENFPSFIHYVYQPTVKQLNNLYNENRYFICSSIYE HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCEEEEEHHHC GFGLTAAEASFSGAIVVTTRNGGVEQFIKNEVTGFVLKERTLNSFMVAIMKLSQKDEELN CCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCEE LFAIESSKKVRIQLDLDINFKKIDSYFKARYNNKRN EEEEECCCEEEEEEEECCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]