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The map label for this gene is 82543311

Identifier: 82543311

GI number: 82543311

Start: 772843

End: 773439

Strand: Reverse

Name: 82543311

Synonym: SBO_0757

Alternate gene names: NA

Gene position: 773439-772843 (Counterclockwise)

Preceding gene: 82543312

Following gene: 82543310

Centisome position: 17.11

GC content: 53.94

Gene sequence:

>597_bases
ATGGGAAAGAGTAAGAAGAACCGCGCTGCGGCGACGAAACAGACCCAGCATAAAAACCAGACTTCAGCCGAAGCATTCAG
CTTCGGCGATCCCGTTCCGGTTCTGGACCGCCGTGAACTACTGGACTATGTGGAATGCGTACAGACAGATCGCTGGTATG
AGCCGCCAGTGAGTTTTGACGGACTGGCGCGCACCTTCCGCGCCGCCGTGCATCACAGTTCACCAATTGCGGTGAAATGC
AACATTCTGATCAGTACCTACATCCCTCACCCGCTGCTCAGCCAGCAGGCTTTTTCACGTTTTGTGCAGGATTATCTGGT
ATTTGGTAACGCTTACCTGGAGAAACGCACAAACCGGTTCGGAGAGGTCATCGCTCTTGAGCCTGCTCTGGCAAAATACA
CCCGACGCGGATTAGACCTGGATACCTACTGGTTTGTGCAATACGGCATGACCACGCAGCCGTATCAGTTCACGAAAGGA
AGCATCTTTCATCTGATGGAACCGGACATCAACCAAGAGATCTACGGCCTGCCAGGTTACCTTTCTGCCATTCCGTCAGC
CCTGCTCAACGAGTCCGCCACGCTGTTCCGCCGATAG

Upstream 100 bases:

>100_bases
CCAGCCATGCCGATCTGGCCTGGGCAACAATGCACGCACTGTTTAACGAACCGCTGCAGGGCGAGTCCGCCAATACCAGC
AATATTGTGGAGATTTTTTG

Downstream 100 bases:

>100_bases
TATTACATTAACGGCAGTCATGCAGGCTTCATCATGTACATGACCGATGCCGCGCAAAACCAGGAGGATGTGAACAACCT
CCGCAATGCGATGAAAAGCG

Product: capsid portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MGKSKKNRAAATKQTQHKNQTSAEAFSFGDPVPVLDRRELLDYVECVQTDRWYEPPVSFDGLARTFRAAVHHSSPIAVKC
NILISTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRR

Sequences:

>Translated_198_residues
MGKSKKNRAAATKQTQHKNQTSAEAFSFGDPVPVLDRRELLDYVECVQTDRWYEPPVSFDGLARTFRAAVHHSSPIAVKC
NILISTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRR
>Mature_197_residues
GKSKKNRAAATKQTQHKNQTSAEAFSFGDPVPVLDRRELLDYVECVQTDRWYEPPVSFDGLARTFRAAVHHSSPIAVKCN
ILISTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGS
IFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRR

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 22606; Mature: 22475

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSKKNRAAATKQTQHKNQTSAEAFSFGDPVPVLDRRELLDYVECVQTDRWYEPPVSFD
CCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
GLARTFRAAVHHSSPIAVKCNILISTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRF
HHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLMEPDINQEIYGLPGY
CCEEEECHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCHH
LSAIPSALLNESATLFRR
HHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
GKSKKNRAAATKQTQHKNQTSAEAFSFGDPVPVLDRRELLDYVECVQTDRWYEPPVSFD
CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
GLARTFRAAVHHSSPIAVKCNILISTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRF
HHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLMEPDINQEIYGLPGY
CCEEEECHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCHH
LSAIPSALLNESATLFRR
HHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]