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The map label for this gene is 82543310

Identifier: 82543310

GI number: 82543310

Start: 772408

End: 772752

Strand: Reverse

Name: 82543310

Synonym: SBO_0756

Alternate gene names: NA

Gene position: 772752-772408 (Counterclockwise)

Preceding gene: 82543311

Following gene: 82543302

Centisome position: 17.1

GC content: 44.64

Gene sequence:

>345_bases
ATGAAAAGCGCCAAAGGACCAGGTAACTTCCGCAATCTGTTTATGTACTCGCCTAACGGCAAAAAGGACGGGCTTCAGAT
CATCCCGTTGTCAGAAGTCGCGGCGAAGGATGAGTTTCTGAACATCAAGAACGTGAGCCGGGATGACATGATGGCGGCGC
ATCGTGTGCCACCGCAAATGATGGGGATTATGCCTAATAATGTCGGGGGGTTTGGGGATGTGGAGAAGGCGAGCCTGGAG
TTTGTACGTAACGAGTTAATACCGTTACAAAAAAGAATGATGGAAATAAATAAATTGGTAAGTGAGAACATTGTTAAATT
TGATAGTTATAAACTAGCTACTTAA

Upstream 100 bases:

>100_bases
CCGCCGATAGTATTACATTAACGGCAGTCATGCAGGCTTCATCATGTACATGACCGATGCCGCGCAAAACCAGGAGGATG
TGAACAACCTCCGCAATGCG

Downstream 100 bases:

>100_bases
CGTAATCACTAAATGAGGTTCTTTAACACAGCTAAAAAATTTATTAATAGCCAGCAGTTTTTATGAATTTCTTCAGCGTG
CAGATACACGCTGAAGATGC

Product: capsid portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKASLE
FVRNELIPLQKRMMEINKLVSENIVKFDSYKLAT

Sequences:

>Translated_114_residues
MKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKASLE
FVRNELIPLQKRMMEINKLVSENIVKFDSYKLAT
>Mature_114_residues
MKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKASLE
FVRNELIPLQKRMMEINKLVSENIVKFDSYKLAT

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 12804; Mature: 12804

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQM
CCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH
MGIMPNNVGGFGDVEKASLEFVRNELIPLQKRMMEINKLVSENIVKFDSYKLAT
HCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQM
CCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH
MGIMPNNVGGFGDVEKASLEFVRNELIPLQKRMMEINKLVSENIVKFDSYKLAT
HCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]