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The map label for this gene is ybeR [H]

Identifier: 82543090

GI number: 82543090

Start: 527121

End: 527828

Strand: Direct

Name: ybeR [H]

Synonym: SBO_0509

Alternate gene names: 82543090

Gene position: 527121-527828 (Clockwise)

Preceding gene: 82543088

Following gene: 82543091

Centisome position: 11.66

GC content: 45.34

Gene sequence:

>708_bases
ATGGACATGGGGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCA
TTCATCCCCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCATGGGGAATTGATGACCGTGATGACCTGC
TGCGCACAATTCACCGAATGATCGAGAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCT
CCATGTGAATGGCGTGACTATCTTGCTGAATTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACAGCCGA
ATGCTGTGGTGAGGGAGGAATTAAAGCATGGGATTATGTCCGGATGGGTTTTTTAAGTCGAATGGGCGTACTTAATAACT
GGTTGAGTGAAGAAGAAAGTCTATGGATCCAGTCGCGTATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAA
TACTTTGCCGGTTATACCTTTGGTCGGCAATATTGGCAGTCTCCCGAAGATGATCATCTGCCTTTATTACGCGAATTCTT
AGCGCGTAAAGAATACGACGATTCCGGCAATGATATGTTTTATCAATTATTTGCCAGTGATGATGCGTATTACCCTACCT
TGTCCTGGCAACCACTGGCTGACTACCCCACATGCCCGGAAACGCTTAAGGATATGAGCGACTTATGA

Upstream 100 bases:

>100_bases
GCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAACTGAGTCTCGAAATGTAGTTTACATTCATTAAATG
AATGTTTAAGGATAAATTAT

Downstream 100 bases:

>100_bases
AAAATTGCTGGAAGATCCTCGATATAGAGGAAACGACTGACGTCGATATTATCCGCCGCGCTTATCTGGCGCTGTTACCG
TCCTTTCATCCAGAAACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL

Sequences:

>Translated_235_residues
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL
>Mature_235_residues
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeU [H]

Homologues:

Organism=Escherichia coli, GI1786865, Length=235, Percent_Identity=97.8723404255319, Blast_Score=479, Evalue=1e-137,
Organism=Escherichia coli, GI1786868, Length=235, Percent_Identity=57.8723404255319, Blast_Score=283, Evalue=9e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009677 [H]

Pfam domain/function: PF06889 DUF1266 [H]

EC number: NA

Molecular weight: Translated: 27670; Mature: 27670

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEHHEEEECCCCCCCCCHHHHHHHHHHH
IENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQYFAGYTFGRQYWQSPEDDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEHHEEEECCCCCCCCCHHHHHHHHHHH
IENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQYFAGYTFGRQYWQSPEDDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]