| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ybeL
Identifier: 82543088
GI number: 82543088
Start: 525429
End: 525911
Strand: Direct
Name: ybeL
Synonym: SBO_0507
Alternate gene names: 82543088
Gene position: 525429-525911 (Clockwise)
Preceding gene: 82543073
Following gene: 82543090
Centisome position: 11.62
GC content: 52.17
Gene sequence:
>483_bases ATGAACAAGGTTGCTCAATATTACCGTGAACTGGTCGCGTCACTGAGCGAACGCCTGCGCAATGGCGAACGTGATATCGA CGCACTGGTGGAACAGGCGCGCGAGCGCGTAATAAAAACAGGGGAGTTAACGCGAACCGAGGTCGATGAGCTGACGCGAG CTGTAAGACGTGACCTGGAAGAGTTCGCCATGAGCTATGAAGAGAGCCTGAAAGAAGAATCTGACAGCGTCTTTATGCGG GTGATTAAAGAAAGCTTATGGCAGGAGCTGGCAGATATCACCGATAAAACGCAGCTTGAATGGCGCGAAGTTTTCCAGGA CCTCAATCATCATGGGGTTTATCACAGCGGAGAAGTGGTCGGGCTGGGAAATCTGGTCTGCGAGAAATGTCACTTCCATC TCCCGATCTACACACCGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCG TAA
Upstream 100 bases:
>100_bases TATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTA ACGACCCGGGAGATGAAACG
Downstream 100 bases:
>100_bases TAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAT CTTCAGTCTCACGAATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMR VIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
Sequences:
>Translated_160_residues MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMR VIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP >Mature_160_residues MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMR VIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=100, Blast_Score=332, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YBEL_ECO57 (P0AAU1)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: A90714 - PIR: E85564 - RefSeq: NP_286369.1 - RefSeq: NP_308708.1 - EnsemblBacteria: EBESCT00000027943 - EnsemblBacteria: EBESCT00000057029 - GeneID: 917042 - GeneID: 957694 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z0790 - KEGG: ecs:ECs0681 - GeneTree: EBGT00050000011007 - HOGENOM: HBG298978 - OMA: GHIPPCP - ProtClustDB: PRK11032 - BioCyc: ECOL83334:ECS0681-MONOMER - InterPro: IPR009912
Pfam domain/function: PF07295 DUF1451
EC number: NA
Molecular weight: Translated: 18797; Mature: 18797
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLE CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEE GLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP CHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCC >Mature Secondary Structure MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLE CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEE GLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP CHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796