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The map label for this gene is allS [H]

Identifier: 82542996

GI number: 82542996

Start: 424585

End: 424887

Strand: Reverse

Name: allS [H]

Synonym: SBO_0406

Alternate gene names: 82542996

Gene position: 424887-424585 (Counterclockwise)

Preceding gene: 82543001

Following gene: 82542995

Centisome position: 9.4

GC content: 50.5

Gene sequence:

>303_bases
ATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGAC
ATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCCAA
CGATGCGCCCTCCTTCGCCATTGAGTCTGGCATGGCGCAAATTTGGCAGCGGCAAAGCGGTAGAAGATATTGTGACCTTG
TTTACCCAGCGCAGGCCGGAAATCAGCGGATTTTTAGAAATTTTCGGCAACCCACGCAGTTAA

Upstream 100 bases:

>100_bases
CGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGT
AGTTGCCATGTTTTACGGCA

Downstream 100 bases:

>100_bases
AAATCAAGTTTCCTTGCGCGTTGGCGCGTAAAATAGCGCGCAAGCTGATTTGAGGTTCACTTTTAACTATGCAAGAGAGA
CACACGGAACAGGACTATCG

Product: IS1 encoded protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPTMRPPSPLSLAWRKFGSGKAVEDIVTL
FTQRRPEISGFLEIFGNPRS

Sequences:

>Translated_100_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPTMRPPSPLSLAWRKFGSGKAVEDIVTL
FTQRRPEISGFLEIFGNPRS
>Mature_100_residues
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPTMRPPSPLSLAWRKFGSGKAVEDIVTL
FTQRRPEISGFLEIFGNPRS

Specific function: Positive regulator essential for the expression of AllD operon. Binds to the AllD promoter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786713, Length=48, Percent_Identity=100, Blast_Score=104, Evalue=8e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 10841; Mature: 10841

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPTMRPPSP
CCCEEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS
HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPTMRPPSP
CCCEEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS
HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]