Click here to switch to the map view.

The map label for this gene is 82543001

Identifier: 82543001

GI number: 82543001

Start: 429876

End: 430055

Strand: Reverse

Name: 82543001

Synonym: SBO_0412

Alternate gene names: NA

Gene position: 430055-429876 (Counterclockwise)

Preceding gene: 82543006

Following gene: 82542996

Centisome position: 9.51

GC content: 47.78

Gene sequence:

>180_bases
TTGCCATGTTTTACGGTAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCCATAA

Upstream 100 bases:

>100_bases
CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG
GCGGTGTAAGTGAACTGTAG

Downstream 100 bases:

>100_bases
ATTCAACGCCGCGAAAACCACACTGCGCAGCTTTCTCAAAACGGGCGAGAAAATCATATTCACCAAATAACATCGATAAA
TTAGCAGAGAAACGTAACAT

Product: IS1 encoded protein

Products: NA

Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MPCFTVMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYP

Sequences:

>Translated_59_residues
MPCFTVMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYP
>Mature_58_residues
PCFTVMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6247; Mature: 6116

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCFTVMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYP
CCCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PCFTVMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYP
CCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA