| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is pgpA [H]
Identifier: 82542906
GI number: 82542906
Start: 325560
End: 326078
Strand: Direct
Name: pgpA [H]
Synonym: SBO_0312
Alternate gene names: 82542906
Gene position: 325560-326078 (Clockwise)
Preceding gene: 82542905
Following gene: 82542911
Centisome position: 7.2
GC content: 52.99
Gene sequence:
>519_bases ATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGG ATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGATGGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCT TTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAGACCGCAAAA GATATGGGCGTGCACGATCACGGCAGCATTGTCTGGGACGAATTTATTGGTATGTGGATCACGCTCATGGCGCTGCAGAC CAATGACTGGCAGTGGGTTGCCGCCGGGTTTGTGATTTTCCGTATTCTGGATATGTGGAAACCGTGGCCGATCCGCTGGT TTGATCGCAATGTGCATGGCGGCATGGGGATCATGATAGATGATATTGTCGCCGGGGTGATCTCCGCTGGCATCCTGTAC TTTATTGGTCATCACTGGCCGCTGGGCATTCTGTCGTAG
Upstream 100 bases:
>100_bases CTGGGCGTACCGTTTACCTGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGTGAACCTGT TACGTTAGACTGGAAAGGAT
Downstream 100 bases:
>100_bases TTGTGCACCGATGCCTGATGTGACGCTTGTTGCGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACTACCGGATGCGG TTTATACGGCGTTTCCAGTT
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAK DMGVHDHGSIVWDEFIGMWITLMALQTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY FIGHHWPLGILS
Sequences:
>Translated_172_residues MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAK DMGVHDHGSIVWDEFIGMWITLMALQTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY FIGHHWPLGILS >Mature_171_residues TILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKD MGVHDHGSIVWDEFIGMWITLMALQTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYF IGHHWPLGILS
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=172, Percent_Identity=99.4186046511628, Blast_Score=342, Evalue=6e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 19449; Mature: 19318
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLY CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALQTNDWQWVAAGFVIF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS HHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLY CCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALQTNDWQWVAAGFVIF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS HHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]