| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is thiL [H]
Identifier: 82542905
GI number: 82542905
Start: 324605
End: 325582
Strand: Direct
Name: thiL [H]
Synonym: SBO_0311
Alternate gene names: 82542905
Gene position: 324605-325582 (Clockwise)
Preceding gene: 82542904
Following gene: 82542906
Centisome position: 7.18
GC content: 54.7
Gene sequence:
>978_bases ATGGCATGTGGCGAGTTCTCCCTGATTGCCCGTTATTTTGACCGTGTAAGAAGTTCTCGTCTTGATGTCGAACTGGGCAT CGGCGACGATTGCGCACTTCTCAATATCCCCGAGAAACAGACCCTGGCGATCAGCACTGATACGCTGGTGGCGGGCAACC ACTTCCTCCCTGATATCGATCCTGCTGATCTGGCGTATAAAGCACTGGCGGTGAACCTAAGCGATCTGGCAGCGATGGGG GCCGATCCGGCCTGGCTGACGCTGGCATTAACCTTGCCGGACGTAGACGAAGCGTGGCTTGAGTCCTTCAGCGACAGTTT GTTTGATCTTCTCAATTATTACGATATGCAACTCATTGGCGGCGATACCACGCGTGGGCCATTATCAATGACGTTGGGTA TCCACGGCTTTGTTCCGATGGGACGAGCCTTAACGCGCTCTGGGGCGAAACCGGGTGACTGGATCTATGTGACCGGTACA CCGGGCGATAGCGCCGCCGGGCTGGCGATTTTGCAAAACCGTTTGCAGGTTGCCGATGCTAAAGATGCGGACTACTTGAT CAAACGTCATCTCCGTCCATCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATCTGGCAAATTCAGCTATCGATCTCT CTGACGGTCTGATTTCCGATCTCGGGCATATCGTGAAAGCCAGCGACTGCGGCGTACGTATTGACCTGGCATTGCTGCCG TTTTCTGATGCGCTTTCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTT GTGTTTCACGGTGCCGGAACTGAACCGTGGAGCGCTGGATGTGGCTCTCGGACACCTGGGCGTACCGTTTACCTGTATCG GGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGTGAACCTGTTACGTTAGACTGGAAAGGATATGAC CATTTTGCCACGCCATAA
Upstream 100 bases:
>100_bases TGATTCGCCCTAACAAAAAGTAATATCCAGGCCGGTAGATTCACGGAAGACCGTTCCATGATCGCCGGCCTTTTCTTTTT TACCTGCTGAGGCATAACGT
Downstream 100 bases:
>100_bases AGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGA TCGTTCCTGGGACGATGGGC
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMG ADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGVRIDLALLP FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYD HFATP
Sequences:
>Translated_325_residues MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMG ADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGVRIDLALLP FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYD HFATP >Mature_324_residues ACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGA DPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTP GDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGVRIDLALLPF SDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDH FATP
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=325, Percent_Identity=99.6923076923077, Blast_Score=653, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 35099; Mature: 34968
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDID CCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEEEECCEEEECCCCCCCCC PADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIG HHHHHHHHHEECHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEC GDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQVADA CCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC KDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGVRIDLALLP CCHHHHHHHHCCCCCCEECCHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCEEEEEEEEC FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADI CHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEECCHHCCC EGLCFIRDGEPVTLDWKGYDHFATP CEEEEEECCCEEEEEECCCCCCCCC >Mature Secondary Structure ACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDID CCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEEEECCEEEECCCCCCCCC PADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIG HHHHHHHHHEECHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEC GDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQVADA CCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC KDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGVRIDLALLP CCHHHHHHHHCCCCCCEECCHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCEEEEEEEEC FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADI CHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEECCHHCCC EGLCFIRDGEPVTLDWKGYDHFATP CEEEEEECCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]