| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is proA [H]
Identifier: 82542846
GI number: 82542846
Start: 264968
End: 266221
Strand: Direct
Name: proA [H]
Synonym: SBO_0249
Alternate gene names: 82542846
Gene position: 264968-266221 (Clockwise)
Preceding gene: 82542845
Following gene: 82542851
Centisome position: 5.86
GC content: 54.07
Gene sequence:
>1254_bases ATGCTGGAACAAATGGGCATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGT GCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGC GAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTGACGCCCGCACGGCTGAAAGGCATTGCCGACGATGTA CGTCAGGTGTGCAACCTCGCCGATCCGGTGGGGCAGGTAATCGATGGCGGCGTACTGGACAGCGGCCTGCGTCTTGAGCG TCGTCGCGTACCGCTGGGGGTTATTGGCGTGATTTATGAAGCGCGCCCGAACGTGACGGTTGATGTCGCTTCGCTGTGCC TGAAAACCGGTAATGCGGTGATCCTGCGTGGTGGTAAAGAAACCTGTCGCACTAACGCGGCAACGGTGGCGGTGATTCAG GACGCCCTGAAATCCTGTGGCTTACCGGCGGGTGCCGTGCAGGCGATTGATAATCCTGACCGTGCGCTGGTCAGTGAAAT GCTGCGTATGGATAAATACATCGACATGCTGATCCCGCGTGGTGGCGCTGGTTTGCATAAACTGTGCCGTGAACAGTCGA CAATCCCGGTGATCACAGGTGGTATAGGCGTATGCCATATTTACGTTGATGAAAGTGTAGAGATCGCTGAAGCATTAAAA GTGATCGTCAACGCGAAAACTCAGCGTCCGAGCACATGTAATACGGTTGAAACGTTGCTGGTGAATAAAAACATCGCCGA TAGCTTCCTGCCCGCATTAAGCAAACAAATGGCGGAAAGCGGCGTGACATTACACGCAGATGCAGCTGCACTGGCGCAGT TGCAGGCAGGCCCTGCGAAGGTGGTTGCTGTTAAAGCCGAAGAGTATGACGATGAGTTTCTGTCATTAGATTTGAACGTC AAAATCGTCAGCGATCTTGACGATGCCATCGCCCATATTCGTGAACACGGCACACAACACTCCGATGCGATCCTGACCTG CGATATGCGCAACGCCCAGCGTTTTGTTAACGAAGTGGATTCGTCCGCTGTTTACGTTAACGCCTCTACGCGTTTTACCG ACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAA GCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAA
Upstream 100 bases:
>100_bases CCGGACACCACTCGCAAGAAATTGATGCAATACTGGGATATGAATACGGCCCGGTTGCCGTTCACCGTGATGACATGATT ACCCGTTAAGGAGCTGGCCG
Downstream 100 bases:
>100_bases ATAAAACCGGGTGATGCAAAAGTAGCCATTTGATTCACAAGGCCATTGACGCATCGCCCGGTTAGTTTTAACCTTGTCCA CCGTGATTCACGTTCGTGAA
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDV RQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNV KIVSDLDDAIAHIREHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLE ALTTYKWIGIGDYTIRA
Sequences:
>Translated_417_residues MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDV RQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNV KIVSDLDDAIAHIREHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLE ALTTYKWIGIGDYTIRA >Mature_417_residues MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDV RQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNV KIVSDLDDAIAHIREHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLE ALTTYKWIGIGDYTIRA
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate [H]
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family [H]
Homologues:
Organism=Homo sapiens, GI62912457, Length=410, Percent_Identity=35.8536585365854, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI21361368, Length=410, Percent_Identity=35.8536585365854, Blast_Score=260, Evalue=2e-69, Organism=Escherichia coli, GI1786438, Length=417, Percent_Identity=99.7601918465228, Blast_Score=843, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569969, Length=415, Percent_Identity=35.6626506024096, Blast_Score=267, Evalue=7e-72, Organism=Caenorhabditis elegans, GI17569967, Length=415, Percent_Identity=35.6626506024096, Blast_Score=267, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6324899, Length=427, Percent_Identity=38.6416861826698, Blast_Score=295, Evalue=1e-80, Organism=Drosophila melanogaster, GI21357643, Length=410, Percent_Identity=35.8536585365854, Blast_Score=270, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.41 [H]
Molecular weight: Translated: 44578; Mature: 44578
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSE CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHH AMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEEE ARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPD CCCCCCHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCCH RALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCEEEEEEECCCHHHHHHHH VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAK HHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCEE VVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTCDMRNAQRFVNEVD EEEEECCCCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCC SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA CCEEEEECCCEECCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHHEEEEECCCEEECC >Mature Secondary Structure MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSE CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHH AMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEEE ARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPD CCCCCCHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCCH RALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCEEEEEEECCCHHHHHHHH VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAK HHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCEE VVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTCDMRNAQRFVNEVD EEEEECCCCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCC SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA CCEEEEECCCEECCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHHEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA