| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yaeH [C]
Identifier: 82542763
GI number: 82542763
Start: 169726
End: 170112
Strand: Reverse
Name: yaeH [C]
Synonym: SBO_0152
Alternate gene names: 82542763
Gene position: 170112-169726 (Counterclockwise)
Preceding gene: 161984987
Following gene: 82542759
Centisome position: 3.76
GC content: 44.44
Gene sequence:
>387_bases ATGTACGACAATCTGAAAAGTCTGGGTATTACCAATCCTGAAGAAATTGATCGTTACAGCCTCCGGCAGGAAGCCAACAA CGATATTCTGAAAATCTATTTCCAGAAAGACAAAGGCGAGTTTTTCGCCAAGAGCGTTAAGTTTAAATATCCGCGTCAGC GTAAAACGGTCGTCGCTGATGGTGTGGGTCAGGGTTATAAAGAAGTCCAGGAAATCAGCCCGAATCTACGGTATATCATT GATGAGCTTGATCAAATCTGCCAGCGTGACCGCAGCGAAGTTGATCTTAAGCGTAAGATCCTCGACGACTTACGTCACCT GGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCTGGAAAAACTAACGCGTAAATAA
Upstream 100 bases:
>100_bases GTCTGGAAGAAAAAGGCTTTCTGCGATCACAGTCGAGCCGGGCGGGCTAGGCCAAATGCTAAAATAAGCACAATTTACTG ACTCATTTTGAGGTAACGCT
Downstream 100 bases:
>100_bases TCCCGAATTGACGGTTAATTCGGGCATTCCCCTCTCCCCTTCGGGCTGAGGGAAATGAGACAGCGCCGCCTCAACCTTAA CGCATAACCTACCGCTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYII DELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEADLEKLTRK
Sequences:
>Translated_128_residues MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYII DELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEADLEKLTRK >Mature_128_residues MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYII DELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEADLEKLTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0325 family [H]
Homologues:
Organism=Escherichia coli, GI1786359, Length=128, Percent_Identity=100, Blast_Score=258, Evalue=7e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020911 [H]
Pfam domain/function: PF11944 DUF3461 [H]
EC number: NA
Molecular weight: Translated: 15096; Mature: 15096
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVAD CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHC GVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEA CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKLTRK HHHHHHCC >Mature Secondary Structure MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVAD CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHC GVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEA CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKLTRK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA