| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yaeI [H]
Identifier: 161984987
GI number: 161984987
Start: 170274
End: 171065
Strand: Reverse
Name: yaeI [H]
Synonym: SBO_0153
Alternate gene names: 161984987
Gene position: 171065-170274 (Counterclockwise)
Preceding gene: 82542765
Following gene: 82542763
Centisome position: 3.78
GC content: 51.39
Gene sequence:
>792_bases TTGCAGGCTACTGCCGCGACGATAGCCACGAGCTCAGGTTTCGGTTATATGCATTACTGGGAGCCAGGCTGGTTTGAATT AATCCGTCACCGCCTCGCCTTTTTTAAAGACAACGCAGCACCATTCAAAATTCTTTTTCTGGCCGATCTCCATTACTCTC GTTTTGTTCCTTTAAGCCTGATTTCTGACGCGATTGCTCTTGGCATAGAACAAAAGCCCGATTTGATATTACTGGGCGGC GATTACGTATTATTTGATATGCCGCTGAATTTTTCGGCGTTTAGTGATGTCCTCTCCCCCCTTGCCGAATGTGCGCCGAC GTTTGCCTGCTTCGGCAACCACGATCGCCCTGTTGGTACAGAAAAAAATCACTTAATTGGCGAGACGTTGAAATCAGTGG GCATCACGGTGTTGTTTAACCAGGCTACGGTGATCGCCACGCCGAACAGGCAATTCGAACTGGTAGGCACCGGTGACTTA TGGGCCGGACAATGCAAACCACCTCCCGCCAGCGAAGCAAATCTGCCAAGACTGATGCTGGCACATAATCCCGACAGCAA AGAAGTCATGCGTGATGAACCCTGGGATCTGATGCTGTGCGGCCATACTCACGGCGGGCAACTGCGCGTACCGTTGGTTG GTGAACCTTTTGCCCCTGTCGAAGATAAACGTTACGTCGCCGGATTAAATGCCTTTGGCGAACGACACATCTACACAACC CGTGGCGTGGGCAGTTTGTATGGTTTGCGTCTGAACTGCCGCCCGGAAGTAACGATGCTGGAACTGGTGTAG
Upstream 100 bases:
>100_bases CGAACTGCTGCGTACCATCGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTTGCAGGGATGAGCGA TGATTTCACGCCGCCGATTG
Downstream 100 bases:
>100_bases AACGTGAATTTTATCACCACAATAAAGCAGGTAATTTTTTGATTTTTACGCCATGATAGAAGTCTGGAAGAAAAAGGCTT TCTGCGATCACAGTCGAGCC
Product: phosphodiesterase YaeI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGG DYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFELVGTGDL WAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTT RGVGSLYGLRLNCRPEVTMLELV
Sequences:
>Translated_263_residues MQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGG DYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFELVGTGDL WAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTT RGVGSLYGLRLNCRPEVTMLELV >Mature_263_residues MQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGG DYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFELVGTGDL WAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTT RGVGSLYGLRLNCRPEVTMLELV
Specific function: Shows phosphodiesterase activity, hydrolyzing phosphodiester bond in the artificial chromogenic substrate bis-p- nitrophenyl phosphate (bis-pNPP) [H]
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081695, Length=263, Percent_Identity=98.0988593155894, Blast_Score=535, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 29088; Mature: 29088
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSL CCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHCCHHHH ISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPVGT HHHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC EKNHLIGETLKSVGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLML CCCHHHHHHHHHCCEEEEEECEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE AHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTT EECCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEE RGVGSLYGLRLNCRPEVTMLELV CCCCCEEEEEEECCCCEEEEEEC >Mature Secondary Structure MQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSL CCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHCCHHHH ISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPVGT HHHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC EKNHLIGETLKSVGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLML CCCHHHHHHHHHCCEEEEEECEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE AHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTT EECCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEE RGVGSLYGLRLNCRPEVTMLELV CCCCCEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]