| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ybfG [H]
Identifier: 161984971
GI number: 161984971
Start: 566834
End: 567244
Strand: Reverse
Name: ybfG [H]
Synonym: SBO_0552
Alternate gene names: 161984971
Gene position: 567244-566834 (Counterclockwise)
Preceding gene: 82543125
Following gene: 82543120
Centisome position: 12.55
GC content: 44.04
Gene sequence:
>411_bases TTGCCACGAGATCCAGTAAGTTGGACACAACGCCCTGAATTCGCAGGCGTGCGGGCTTTACCCATCGCTGACGATGTCGC AGGGGGAATTTTTGCTCTTAATGGTGGCGATCTTGGGGAAGATACTGGCTGCGTTTATTATTTTGCGCCAGATACGCTGA ATTGGGAAAGTCTGGAAGTTGGATATTCTGAGTTTCTTCAGTGGGCATTATCCGGTGATTTAGATACCTTCTATGAAAAT GTACGATGGCAGCAATGGCGAGAAGACGTAATAAAATTATCGGCAACGGAAGCCTTCACGTTCTACCCTTTCTTATGGGT ACAAAGTGAAGAAGCAAGAACAAGAAAAGTTATTTCGCTTACTGAACTCTGGGAAATGCAGTATCAAATGAAAGAAACAT TCACGCAATAA
Upstream 100 bases:
>100_bases GGTGACAACAAAATCACCGATGGGTGCGCTTGTCTATGGCTCCGGAGGTCTGCTGATTGATAATGGTTGGTTACGCATAG CAGGATCTGGTCACCCCCGG
Downstream 100 bases:
>100_bases GACATGTTCAGGTCCGGGTTTCATTCCCGGACTCACTATTTTAATGTGTATTTATCGCTTTCAATTCTTGCTGGCAATTT TCTGACTGGCAGCGTCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
Sequences:
>Translated_136_residues MPRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ >Mature_135_residues PRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYENV RWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021239 [H]
Pfam domain/function: PF10946 DUF2625 [H]
EC number: NA
Molecular weight: Translated: 15812; Mature: 15681
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEV CCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHC GYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISL CHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHH TELWEMQYQMKETFTQ HHHHHHHHHHHHHCCC >Mature Secondary Structure PRDPVSWTQRPEFAGVRALPIADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEV CCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHC GYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISL CHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHH TELWEMQYQMKETFTQ HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503 [H]