| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is mnmG
Identifier: 78780152
GI number: 78780152
Start: 1658945
End: 1660933
Strand: Direct
Name: mnmG
Synonym: PMT9312_1767
Alternate gene names: 78780152
Gene position: 1658945-1660933 (Clockwise)
Preceding gene: 78780151
Following gene: 78780153
Centisome position: 97.06
GC content: 33.08
Gene sequence:
>1989_bases ATGCAAGATCATCACTCAACAAATGAATCTTTTGACATTGTCGTCATTGGAGGAGGACATGCGGGATGTGAAGCAGCTAT AACATCAGCAAAATTAGGATTTTCTACAGCCTTATTCACAATCAATTTAGATAGGATTGCCTGGCAACCTTGTAACCCTG CAGTTGGCGGGCCAGCAAAAAGTCAGTTAGTGCATGAAGTTGATGCATTAGGAGGAATCATTGGAAAATTAGCTGATAAA ACAGCTATACAAAAAAGAATATTAAATGCAAGTAAAGGACCAGCTGTATGGGCATTAAGAGCTCAAACAGATAAAAGAGA ATACTCAAAAAAGATGATCGAAATCCTTCAAAATACAGATAATTTATCTTTAAAAGAAGCAATGATTACTGAACTGGATA TTGCAAAGACTGAAGAAATTGGATTGAACTCAAAAAAAATCGTAAAAAAAAGAATAAAGGGTGTCAGGACTTTCTTTGGT AGTTATTATTCAGCAAGATCAGTTATCATCACAGCTGGTACGTTCTTAGAAGGAAGAATATGGATAGGAAATAAATCAAT GTCAGCTGGTAGATCGGGCGAACAAGCAGCAAAAGGTCTTACTAAAAATTTGCACGAAATTGGTATCAAAACAGAACGTT TAAAAACAGGAACTCCAGCAAGAGTTGATAAAAGAAGTATAATTTTTGATGAATTAGATGCTCAACCAAGTACTGCAGCA GATAAATATTTTTCGTTTGACCCAAATATAAAAAATAATATGCCCCAAGTTAGTTGTCACATAACAAGAACAACTACCAA AACACATCAACTAATTCGAGACAATTTACATTTAACTCCCATTTACGGCGGTTTTATTGATAGTAAGGGGCCAAGATATT GTCCATCAATTGAAGATAAAATCGTTAAATTTGCTGATAAAGAATCACATCAAATTTTCTTAGAACCAGAAGGAATTAAT ACCCCTGAAATATATGTACAAGGATTTTCTACAGGTTTACCCGAAAATATTCAATTAGAACTTTTAAGAACCTTACCTGG ATTAAGTGAATGTAAAATGTTGCGACCAGCATATGCTGTCGAGTACGACTATATACCTGCAACACAGCTCCAAACATCAC TAGAAACGAAAGAAATTGAATATTTATTTAGCGCTGGACAAATTAATGGAACTACTGGTTATGAAGAAGCAGCAGCACAA GGATTAGTTGCAGGAGTCAATGCGACAAGAAAACTAAACGAAAAAGACCCAATAATCTTCACTAGAGAAAGCAGTTATAT AGGAACAATGATCAATGATTTAATTACCAAAGATCTCAAAGAACCATACAGAGTTCTCACTAGTAGGAGTGAATATAGGT TAACTCTTAGAGGAGATAATGCAGATAGAAGATTAACCCCATTAGGTTATCAAATAGGGCTAATTGATGAGAAAAGATGG TGGGCCTATCAAGAAAAAATGAACCTCCTCGAGGAAGAAAAATTAAGATTAAATAACACCCGTTTAAAAAATACCGATGA AATATCAAAAAACATAGAATTAGACACGGGATCAAAGATCAAAGGCTCAACAACTTTGAAAGAACTCTTAAAAAGACCAA ACTTTCATTATTCAGATCTAATTAAATATAATTTGACTGAAAAAAATCTAGGTTCTTCAATACAGGAAGGTGTTGAAATA GATATTAAATACGAGGGTTACCTTAAAAGACAAAAAAACAACATTGAACAAATAAATCGTCAAAGCTGTAAATCTCTACC TCAAGAAATAAATTATGAAAAGATAGATACATTATCTTTAGAAGCTAGAGAAAATTTGAATAAGATAAAACCAAAAAATT TTGGTGATGCTTCAAAAATTCCTGGAGTAAGCAAAGCTGATTTAACTGCATTACTTGTTTGGCTAAAAATAAGAGAAATA AAGAAAGAAAAGGCAAATATTTTTGTCAAAAAAAGTTATCATCTTAAAAGTAATCCGTCAGAGCACTGA
Upstream 100 bases:
>100_bases GTCACTAAACATAGAAATGGACCCGTAGGAACTGTTAAATTATTATTTGAACCTCAATTTACGAGATTTAGAAATTTAGC TAATTAAATCGATCCGAATA
Downstream 100 bases:
>100_bases ATAATAAACTTTTTAACTCACCAAAAATTTTATGGGAAGAAAAAGCCTCTACTTTTTTAGTGAAAAATTCATTACCAAAA ATATCAGGTCCATGGAAATT
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MQDHHSTNESFDIVVIGGGHAGCEAAITSAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEVDALGGIIGKLADK TAIQKRILNASKGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEAMITELDIAKTEEIGLNSKKIVKKRIKGVRTFFG SYYSARSVIITAGTFLEGRIWIGNKSMSAGRSGEQAAKGLTKNLHEIGIKTERLKTGTPARVDKRSIIFDELDAQPSTAA DKYFSFDPNIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADKESHQIFLEPEGIN TPEIYVQGFSTGLPENIQLELLRTLPGLSECKMLRPAYAVEYDYIPATQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQ GLVAGVNATRKLNEKDPIIFTRESSYIGTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRW WAYQEKMNLLEEEKLRLNNTRLKNTDEISKNIELDTGSKIKGSTTLKELLKRPNFHYSDLIKYNLTEKNLGSSIQEGVEI DIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEARENLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREI KKEKANIFVKKSYHLKSNPSEH
Sequences:
>Translated_662_residues MQDHHSTNESFDIVVIGGGHAGCEAAITSAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEVDALGGIIGKLADK TAIQKRILNASKGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEAMITELDIAKTEEIGLNSKKIVKKRIKGVRTFFG SYYSARSVIITAGTFLEGRIWIGNKSMSAGRSGEQAAKGLTKNLHEIGIKTERLKTGTPARVDKRSIIFDELDAQPSTAA DKYFSFDPNIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADKESHQIFLEPEGIN TPEIYVQGFSTGLPENIQLELLRTLPGLSECKMLRPAYAVEYDYIPATQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQ GLVAGVNATRKLNEKDPIIFTRESSYIGTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRW WAYQEKMNLLEEEKLRLNNTRLKNTDEISKNIELDTGSKIKGSTTLKELLKRPNFHYSDLIKYNLTEKNLGSSIQEGVEI DIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEARENLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREI KKEKANIFVKKSYHLKSNPSEH >Mature_662_residues MQDHHSTNESFDIVVIGGGHAGCEAAITSAKLGFSTALFTINLDRIAWQPCNPAVGGPAKSQLVHEVDALGGIIGKLADK TAIQKRILNASKGPAVWALRAQTDKREYSKKMIEILQNTDNLSLKEAMITELDIAKTEEIGLNSKKIVKKRIKGVRTFFG SYYSARSVIITAGTFLEGRIWIGNKSMSAGRSGEQAAKGLTKNLHEIGIKTERLKTGTPARVDKRSIIFDELDAQPSTAA DKYFSFDPNIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDKIVKFADKESHQIFLEPEGIN TPEIYVQGFSTGLPENIQLELLRTLPGLSECKMLRPAYAVEYDYIPATQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQ GLVAGVNATRKLNEKDPIIFTRESSYIGTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRW WAYQEKMNLLEEEKLRLNNTRLKNTDEISKNIELDTGSKIKGSTTLKELLKRPNFHYSDLIKYNLTEKNLGSSIQEGVEI DIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEARENLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREI KKEKANIFVKKSYHLKSNPSEH
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=648, Percent_Identity=38.4259259259259, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI19882217, Length=673, Percent_Identity=36.998514115899, Blast_Score=398, Evalue=1e-110, Organism=Homo sapiens, GI183227703, Length=688, Percent_Identity=36.1918604651163, Blast_Score=392, Evalue=1e-109, Organism=Escherichia coli, GI2367273, Length=638, Percent_Identity=43.4169278996865, Blast_Score=536, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17534255, Length=634, Percent_Identity=36.5930599369085, Blast_Score=397, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6321202, Length=629, Percent_Identity=41.0174880763116, Blast_Score=452, Evalue=1e-128, Organism=Drosophila melanogaster, GI24658174, Length=659, Percent_Identity=37.9362670713202, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_PROM9 (Q317W7)
Other databases:
- EMBL: CP000111 - RefSeq: YP_398264.1 - ProteinModelPortal: Q317W7 - SMR: Q317W7 - STRING: Q317W7 - GeneID: 3766593 - GenomeReviews: CP000111_GR - KEGG: pmi:PMT9312_1767 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - BioCyc: PMAR74546:PMT9312_1767-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 74421; Mature: 74421
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDHHSTNESFDIVVIGGGHAGCEAAITSAKLGFSTALFTINLDRIAWQPCNPAVGGPAK CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEHHEEECCCCCCCCCCHH SQLVHEVDALGGIIGKLADKTAIQKRILNASKGPAVWALRAQTDKREYSKKMIEILQNTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC NLSLKEAMITELDIAKTEEIGLNSKKIVKKRIKGVRTFFGSYYSARSVIITAGTFLEGRI CCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEE WIGNKSMSAGRSGEQAAKGLTKNLHEIGIKTERLKTGTPARVDKRSIIFDELDAQPSTAA EECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEHHHCCCCCCCCH DKYFSFDPNIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDK HCEEECCCCCCCCCCEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHH IVKFADKESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLSECKMLRPAYAV HHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCHHEE EYDYIPATQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLNEKDPIIF EECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCEEE TRESSYIGTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRW EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCEEEEEECCHHH WAYQEKMNLLEEEKLRLNNTRLKNTDEISKNIELDTGSKIKGSTTLKELLKRPNFHYSDL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEECCCCCCCCCCHHHHHHHHCCCCCHHHH IKYNLTEKNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSL EEECCCHHHCCHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCEEEH EARENLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREIKKEKANIFVKKSYHLKSNPS HHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCC EH CC >Mature Secondary Structure MQDHHSTNESFDIVVIGGGHAGCEAAITSAKLGFSTALFTINLDRIAWQPCNPAVGGPAK CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEHHEEECCCCCCCCCCHH SQLVHEVDALGGIIGKLADKTAIQKRILNASKGPAVWALRAQTDKREYSKKMIEILQNTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC NLSLKEAMITELDIAKTEEIGLNSKKIVKKRIKGVRTFFGSYYSARSVIITAGTFLEGRI CCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEE WIGNKSMSAGRSGEQAAKGLTKNLHEIGIKTERLKTGTPARVDKRSIIFDELDAQPSTAA EECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEHHHCCCCCCCCH DKYFSFDPNIKNNMPQVSCHITRTTTKTHQLIRDNLHLTPIYGGFIDSKGPRYCPSIEDK HCEEECCCCCCCCCCEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHH IVKFADKESHQIFLEPEGINTPEIYVQGFSTGLPENIQLELLRTLPGLSECKMLRPAYAV HHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCHHEE EYDYIPATQLQTSLETKEIEYLFSAGQINGTTGYEEAAAQGLVAGVNATRKLNEKDPIIF EECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCEEE TRESSYIGTMINDLITKDLKEPYRVLTSRSEYRLTLRGDNADRRLTPLGYQIGLIDEKRW EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCEEEEEECCHHH WAYQEKMNLLEEEKLRLNNTRLKNTDEISKNIELDTGSKIKGSTTLKELLKRPNFHYSDL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEECCCCCCCCCCHHHHHHHHCCCCCHHHH IKYNLTEKNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSL EEECCCHHHCCHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCEEEH EARENLNKIKPKNFGDASKIPGVSKADLTALLVWLKIREIKKEKANIFVKKSYHLKSNPS HHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCC EH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA