| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is cysE [H]
Identifier: 78780116
GI number: 78780116
Start: 1617357
End: 1618094
Strand: Direct
Name: cysE [H]
Synonym: PMT9312_1731
Alternate gene names: 78780116
Gene position: 1617357-1618094 (Clockwise)
Preceding gene: 78780115
Following gene: 78780118
Centisome position: 94.63
GC content: 36.31
Gene sequence:
>738_bases ATGATTTTAAGAACTTTTAAATCTGATATAGCAATTATCAAAGAGAGAGATCCTGCTGCTAGAGGAATATTAGAGATTTT TCTTTGTTACCCAGGTTTCCAATCAATAGTTATTCATAGGTTAACTCATCAATTATGGCAATTAAAAATTCCTCTAATTC CCCGCTTATTAAGTCATCTCAATAGGTTAGTAACAGGTATTGAAATCCATCCTGGAGCAAAAATTGGTAAACGGGTTTTC ATAGATCATGGTATGGGAGTTGTTATTGGTGAAACGGCTGAGATAGGAAATAATTGTCTTCTTTATCAGGGAGTTACATT AGGAGGAACTGGTAAAAGTCATGGTAAAAGACACCCAACCTTAATGGAAAATGTTGTAGTTGGAGCAGGTGCAAAAGTTC TTGGGTCCATCACAGTAGGATCTAATACACGTATTGGGGCAGGTTCAGTAGTTGTCCGTAATGTAGAAGGGAACAGTACT GTGGTTGGAGTTCCTGGAAGAGTGGTGCATCAGAGTGGGGTCAAAGTTAATCCATTAGCTCACTCTGCCCTACCAGATAC AGAAGCTAATGTTATAAAAAATTTAATGGATAGAATAGACTCACTTGAGAATGAAATTCTTAAGTTACAAAAAACCCTGC TGTGTCTAGCTAACTCAGAATCTATTGATATTTCTAAACTTGGTGAGGCTCAAAATCTTAAAGACAAAGAAATCATAGAA TTTCTTGGAGATGATTAA
Upstream 100 bases:
>100_bases TCAGCTTATGAGATTACCTAAAATAATATGTGCTAAAAATTATTTAAGTATCGAAACAATAAATCATTTAAAAAAAGAAA TAGGAGTTATTAATTAAACT
Downstream 100 bases:
>100_bases ATATTGATTTAATTTTTATCATCCTTATCAGTTTTAGGTTGAAACATAAACATTGAATAAATAACATTGCGTCTCATATT AGTCATCATTTCGAGAAACA
Product: Serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MILRTFKSDIAIIKERDPAARGILEIFLCYPGFQSIVIHRLTHQLWQLKIPLIPRLLSHLNRLVTGIEIHPGAKIGKRVF IDHGMGVVIGETAEIGNNCLLYQGVTLGGTGKSHGKRHPTLMENVVVGAGAKVLGSITVGSNTRIGAGSVVVRNVEGNST VVGVPGRVVHQSGVKVNPLAHSALPDTEANVIKNLMDRIDSLENEILKLQKTLLCLANSESIDISKLGEAQNLKDKEIIE FLGDD
Sequences:
>Translated_245_residues MILRTFKSDIAIIKERDPAARGILEIFLCYPGFQSIVIHRLTHQLWQLKIPLIPRLLSHLNRLVTGIEIHPGAKIGKRVF IDHGMGVVIGETAEIGNNCLLYQGVTLGGTGKSHGKRHPTLMENVVVGAGAKVLGSITVGSNTRIGAGSVVVRNVEGNST VVGVPGRVVHQSGVKVNPLAHSALPDTEANVIKNLMDRIDSLENEILKLQKTLLCLANSESIDISKLGEAQNLKDKEIIE FLGDD >Mature_245_residues MILRTFKSDIAIIKERDPAARGILEIFLCYPGFQSIVIHRLTHQLWQLKIPLIPRLLSHLNRLVTGIEIHPGAKIGKRVF IDHGMGVVIGETAEIGNNCLLYQGVTLGGTGKSHGKRHPTLMENVVVGAGAKVLGSITVGSNTRIGAGSVVVRNVEGNST VVGVPGRVVHQSGVKVNPLAHSALPDTEANVIKNLMDRIDSLENEILKLQKTLLCLANSESIDISKLGEAQNLKDKEIIE FLGDD
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=168, Percent_Identity=42.2619047619048, Blast_Score=140, Evalue=9e-35, Organism=Escherichia coli, GI1788371, Length=126, Percent_Identity=35.7142857142857, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR010493 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF06426 SATase_N [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 26462; Mature: 26462
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRTFKSDIAIIKERDPAARGILEIFLCYPGFQSIVIHRLTHQLWQLKIPLIPRLLSHL CEEECCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH NRLVTGIEIHPGAKIGKRVFIDHGMGVVIGETAEIGNNCLLYQGVTLGGTGKSHGKRHPT HHHHHCCEECCCCHHCCEEEEECCCEEEEECHHHHCCCEEEEECEEECCCCCCCCCCCCH LMENVVVGAGAKVLGSITVGSNTRIGAGSVVVRNVEGNSTVVGVPGRVVHQSGVKVNPLA HHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCEECCCCCEECCCH HSALPDTEANVIKNLMDRIDSLENEILKLQKTLLCLANSESIDISKLGEAQNLKDKEIIE HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHH FLGDD HHCCC >Mature Secondary Structure MILRTFKSDIAIIKERDPAARGILEIFLCYPGFQSIVIHRLTHQLWQLKIPLIPRLLSHL CEEECCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH NRLVTGIEIHPGAKIGKRVFIDHGMGVVIGETAEIGNNCLLYQGVTLGGTGKSHGKRHPT HHHHHCCEECCCCHHCCEEEEECCCEEEEECHHHHCCCEEEEECEEECCCCCCCCCCCCH LMENVVVGAGAKVLGSITVGSNTRIGAGSVVVRNVEGNSTVVGVPGRVVHQSGVKVNPLA HHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCEECCCCCEECCCH HSALPDTEANVIKNLMDRIDSLENEILKLQKTLLCLANSESIDISKLGEAQNLKDKEIIE HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHH FLGDD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8661945 [H]