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The map label for this gene is farR [C]

Identifier: 78780115

GI number: 78780115

Start: 1616367

End: 1617353

Strand: Direct

Name: farR [C]

Synonym: PMT9312_1730

Alternate gene names: 78780115

Gene position: 1616367-1617353 (Clockwise)

Preceding gene: 78780114

Following gene: 78780116

Centisome position: 94.57

GC content: 34.14

Gene sequence:

>987_bases
GTGAGATTCCGTATTCAACAAGAAAGTGATATCCCAGCATCGACACAACTCTATAATCAAATTTGCTTTGCCATAGCTGC
AAGACATTATCCTCCGGGCCATCGACTTCCCAGCACTAGGCAACTTGCAATGCAGACTGGACTCCATAGAAATACCATAA
GCAAAGTTTACAGACAACTTGAAATGGATGGGGTTGTTGAAGCGATAGCTGGATCTGGTATCTATGTAAGAGATAATCTT
ACTAAAAGAGACTTTAAAAAATCGATATACTCAAAAGACAAAATAAGTAAACAACCTGATCAAGAAATAAAGCAGACTAT
TGATAAATTAATTAATCTTGGCTGCACCTTACAAGAAGCAAGAGAAATATTTACCAATGAAATTGATTGGCGTATTAAAT
GTGGCGCAAAAATTATTGTAAGTACTCCTAGAGAAGATATAGGAGCTTCTATGTTAATCGCAGAAGAGCTATCTCCAAAA
ATTAATGTGCCAGTAGAAGTTATTCCTATGGAAGAATTAGAAAAAGTTTTGAGTAATTCAAATAATGGCACTATTGTCAC
AAGCAGATATTTTTTACAGCCTTTAGAAAAAGTTGCTAAACATCATGGAGTTCGTGCTATTGCAGTTGACTTGAGCGACT
TTCAAAAGGAGTTAGATATTATCAAAGAATTCAATGCTGGAAGTTGTGTAGGTATCGTTAGCATTAGCCCTGGTTTATTG
AGAGCAGCAGAAGTTATTATACACAGCATGAGAGGAGGTGAATTAATTCTTATGACGGCAATCTCAGACAATAATAGTAG
ACTACTATCACTTTTAAAGGCCTCAAACCACATAGTTTGTGACGGGCCTAGTTTATCAGTTGTGGAAAACACATTATTAA
AAAATAGATCTCAGCTTATGAGATTACCTAAAATAATATGTGCTAAAAATTATTTAAGTATCGAAACAATAAATCATTTA
AAAAAAGAAATAGGAGTTATTAATTAA

Upstream 100 bases:

>100_bases
TATTAAGAAAGATGAAGGATAAGAAATTATTTTCGAAAAACTATGCCAAATGTTAAAGTGTCACTATGTATAAAAATTAA
TAAGTAAGGATTTTTCAAAA

Downstream 100 bases:

>100_bases
ACTATGATTTTAAGAACTTTTAAATCTGATATAGCAATTATCAAAGAGAGAGATCCTGCTGCTAGAGGAATATTAGAGAT
TTTTCTTTGTTACCCAGGTT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; GntR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Repressor

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MRFRIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLEMDGVVEAIAGSGIYVRDNL
TKRDFKKSIYSKDKISKQPDQEIKQTIDKLINLGCTLQEAREIFTNEIDWRIKCGAKIIVSTPREDIGASMLIAEELSPK
INVPVEVIPMEELEKVLSNSNNGTIVTSRYFLQPLEKVAKHHGVRAIAVDLSDFQKELDIIKEFNAGSCVGIVSISPGLL
RAAEVIIHSMRGGELILMTAISDNNSRLLSLLKASNHIVCDGPSLSVVENTLLKNRSQLMRLPKIICAKNYLSIETINHL
KKEIGVIN

Sequences:

>Translated_328_residues
MRFRIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLEMDGVVEAIAGSGIYVRDNL
TKRDFKKSIYSKDKISKQPDQEIKQTIDKLINLGCTLQEAREIFTNEIDWRIKCGAKIIVSTPREDIGASMLIAEELSPK
INVPVEVIPMEELEKVLSNSNNGTIVTSRYFLQPLEKVAKHHGVRAIAVDLSDFQKELDIIKEFNAGSCVGIVSISPGLL
RAAEVIIHSMRGGELILMTAISDNNSRLLSLLKASNHIVCDGPSLSVVENTLLKNRSQLMRLPKIICAKNYLSIETINHL
KKEIGVIN
>Mature_328_residues
MRFRIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLEMDGVVEAIAGSGIYVRDNL
TKRDFKKSIYSKDKISKQPDQEIKQTIDKLINLGCTLQEAREIFTNEIDWRIKCGAKIIVSTPREDIGASMLIAEELSPK
INVPVEVIPMEELEKVLSNSNNGTIVTSRYFLQPLEKVAKHHGVRAIAVDLSDFQKELDIIKEFNAGSCVGIVSISPGLL
RAAEVIIHSMRGGELILMTAISDNNSRLLSLLKASNHIVCDGPSLSVVENTLLKNRSQLMRLPKIICAKNYLSIETINHL
KKEIGVIN

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36682; Mature: 36682

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQL
CCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
EMDGVVEAIAGSGIYVRDNLTKRDFKKSIYSKDKISKQPDQEIKQTIDKLINLGCTLQEA
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHH
REIFTNEIDWRIKCGAKIIVSTPREDIGASMLIAEELSPKINVPVEVIPMEELEKVLSNS
HHHHHCCCCEEEECCCEEEEECCCHHHCHHHEEHHHCCCCCCCCEEEECHHHHHHHHCCC
NNGTIVTSRYFLQPLEKVAKHHGVRAIAVDLSDFQKELDIIKEFNAGSCVGIVSISPGLL
CCCEEEEHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
RAAEVIIHSMRGGELILMTAISDNNSRLLSLLKASNHIVCDGPSLSVVENTLLKNRSQLM
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHH
RLPKIICAKNYLSIETINHLKKEIGVIN
HHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFRIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQL
CCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
EMDGVVEAIAGSGIYVRDNLTKRDFKKSIYSKDKISKQPDQEIKQTIDKLINLGCTLQEA
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHH
REIFTNEIDWRIKCGAKIIVSTPREDIGASMLIAEELSPKINVPVEVIPMEELEKVLSNS
HHHHHCCCCEEEECCCEEEEECCCHHHCHHHEEHHHCCCCCCCCEEEECHHHHHHHHCCC
NNGTIVTSRYFLQPLEKVAKHHGVRAIAVDLSDFQKELDIIKEFNAGSCVGIVSISPGLL
CCCEEEEHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
RAAEVIIHSMRGGELILMTAISDNNSRLLSLLKASNHIVCDGPSLSVVENTLLKNRSQLM
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHH
RLPKIICAKNYLSIETINHLKKEIGVIN
HHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA