| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is crcB1
Identifier: 78780109
GI number: 78780109
Start: 1611630
End: 1611959
Strand: Reverse
Name: crcB1
Synonym: PMT9312_1724
Alternate gene names: 78780109
Gene position: 1611959-1611630 (Counterclockwise)
Preceding gene: 78780110
Following gene: 78780108
Centisome position: 94.31
GC content: 19.39
Gene sequence:
>330_bases ATGAAAATAAAAATTTATATTTATATTCTTTTAGCTTGTTATATAGCTTCTTTTTTAAGATTATTTATAAATAATAATTT CATTGTTTCAATCATTGGATCATTACTTTTTGGTTTTTTTATTGACAAAAGATTAAGTTACTCGATAGAAAAAATTATAT TAAGCGGTTTTTTTTCGTGCTTTACATCTTTTAGCGGATTTATATATTTTTTGTATAAAGTTTTTAATCAAGGAGACTTG ATGAAATTCATAATTTTTTGTAATTTAATTATTATTATAAATTTATTGGTAATGTATTTTGGGTTTTGGATAAGTAGAAA AATTACTTAG
Upstream 100 bases:
>100_bases AAAAGAGGAAATTTATGCATTTATTTTTTCACTATTTCGAGGTAATAATAATTTCCTTTATATGCTTTTATTTAGGTTAT TATTTGATGCAAATTATAAA
Downstream 100 bases:
>100_bases ATTTCATATAATGGTGTTGTTACTTTGAAAAGGAATTATATTTTATGAATGAAGATAATCTTGAAACTGTTACATCCTTA CCTTCAGATTTAAGTACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKIKIYIYILLACYIASFLRLFINNNFIVSIIGSLLFGFFIDKRLSYSIEKIILSGFFSCFTSFSGFIYFLYKVFNQGDL MKFIIFCNLIIIINLLVMYFGFWISRKIT
Sequences:
>Translated_109_residues MKIKIYIYILLACYIASFLRLFINNNFIVSIIGSLLFGFFIDKRLSYSIEKIILSGFFSCFTSFSGFIYFLYKVFNQGDL MKFIIFCNLIIIINLLVMYFGFWISRKIT >Mature_109_residues MKIKIYIYILLACYIASFLRLFINNNFIVSIIGSLLFGFFIDKRLSYSIEKIILSGFFSCFTSFSGFIYFLYKVFNQGDL MKFIIFCNLIIIINLLVMYFGFWISRKIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB1_PROM9 (Q318B0)
Other databases:
- EMBL: CP000111 - RefSeq: YP_398221.1 - STRING: Q318B0 - GeneID: 3766549 - GenomeReviews: CP000111_GR - KEGG: pmi:PMT9312_1725 - HOGENOM: HBG635100 - OMA: LNLIIMY - ProtClustDB: CLSK922236 - BioCyc: PMAR74546:PMT9312_1724-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 12905; Mature: 12905
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x11f81848)-; HASH(0x1394e7e0)-; HASH(0x12e1628c)-;
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKIYIYILLACYIASFLRLFINNNFIVSIIGSLLFGFFIDKRLSYSIEKIILSGFFSC CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSFSGFIYFLYKVFNQGDLMKFIIFCNLIIIINLLVMYFGFWISRKIT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MKIKIYIYILLACYIASFLRLFINNNFIVSIIGSLLFGFFIDKRLSYSIEKIILSGFFSC CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSFSGFIYFLYKVFNQGDLMKFIIFCNLIIIINLLVMYFGFWISRKIT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA