| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78780108
Identifier: 78780108
GI number: 78780108
Start: 1610179
End: 1611585
Strand: Reverse
Name: 78780108
Synonym: PMT9312_1723
Alternate gene names: NA
Gene position: 1611585-1610179 (Counterclockwise)
Preceding gene: 78780109
Following gene: 78780107
Centisome position: 94.29
GC content: 36.67
Gene sequence:
>1407_bases ATGAATGAAGATAATCTTGAAACTGTTACATCCTTACCTTCAGATTTAAGTACTCGAGAAAATATTACTATTCAACTGGA AGAATTGCTCGTCGCAGGAAATTATGATGAGGCAAAGTTACTTTTAGAACCTTCTCAACCTGTTGATATTGCAGATGCTA TTGGAAGTCTTCCATTAATATTGCAGGCATTAGCATTTCGATTACTAAAGAAAAATGAGGCGATTGAGGTTTATGAATAT TTAGATCCAATAGTTCAGCAAACTTTATTGGATAGACTTCGTTCGGGAGAAGTTTTAGAAATCGTTGAGAAAATGTCTCC TGATGATAGGGTTCAACTCTTTGACGAATTACCTGCAAAAGTTGTAAGAAAATTTCTGTCTGCTCTAAGTCCTGGTGAAA GGAAAGTAACAGCTGAATTGCTTGGATATGAGCCTGAAACTGCTGGAAGATTAATGACAACTGAATTCATAGATCTTAAA GAGATGCAAACGGCAGCCGAGGCTCTTGCTTTAGTCAGAAAAAGAGCTCCATATACAGAAACAATTTATAGTTTATATGT TACAGACAAGGAAAGACATTTAACTGGTATTCTTTCTTTGAGAGACCTTGTAACTGCTGATCCCTCTAAGCCAATTGGAG ATGTTATGACTAAAGATGTAGTTAATATTTCTACTAATACGAATCAAGAAGAGGTGGCAAGAGCAATACAAAGATATGAC TTTTTAGCGCTCCCAGTTGTCGATAAAGAAAAAAGACTTGTTGGGATAGTAACTGTTGATGATTTAATTGATGTTATAGA GCAAGAAGCCACAAGAGATATTTATGCAGCGGGGGCAGTTCAACCTGGAGATGAAGATGATTATTTTCAAAGTAGTTTAT TTACGATAGCTCGAAGAAGAATTTTGTGGTTGTTGATTTTGGTTTTGGCAAATGGTTTGACGACAAAAGTTATAGCGATG AATGATCAAATATTAAAAGAAATAGTTTTGCTAGCTGCATTTATTCCACTGCTAATAGGTACTGGGGGAAATGTTGGAGC TCAGAGTTCAACAGTTGTCATTAGAGGTTTAAGTACTCAAAAATTGAAGTCTCTTGGTGCAATTAAGGCGGTAGTTAAGG AGGCAATCACAGGCGCTCTATTAGGTGTTTTGATGATGCTAGTTGTATTTCCTTTCGCTTGGTGGCAAGGAGAAGGTCCT TTAATAGCCTCTGCAGTAGGAATAAGTTTAATATCTATAACGACTTTAGCTGCTACAACAGGCGCTATTCTCCCATTGTT GTTTGACAGGATGAGACTGGATCCAGCCTTAATGTCCTCTCCTTTCATAACAACTATCACTGATATTGCAGGTGTATTTA TATATCTAAGTACCGCAAAATGGCTATTAAGCCTTTCGTTGATTTAA
Upstream 100 bases:
>100_bases TTATAAATTTATTGGTAATGTATTTTGGGTTTTGGATAAGTAGAAAAATTACTTAGATTTCATATAATGGTGTTGTTACT TTGAAAAGGAATTATATTTT
Downstream 100 bases:
>100_bases AATCAACTAGGTATTTATTCTCATTTTTGTAAATTTGTGGATTTTTTTGTTTAACTTTACAATTCTTAATGGTATTGTTT ACAAAACAACATTCAATTTT
Product: Mg2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNEDNLETVTSLPSDLSTRENITIQLEELLVAGNYDEAKLLLEPSQPVDIADAIGSLPLILQALAFRLLKKNEAIEVYEY LDPIVQQTLLDRLRSGEVLEIVEKMSPDDRVQLFDELPAKVVRKFLSALSPGERKVTAELLGYEPETAGRLMTTEFIDLK EMQTAAEALALVRKRAPYTETIYSLYVTDKERHLTGILSLRDLVTADPSKPIGDVMTKDVVNISTNTNQEEVARAIQRYD FLALPVVDKEKRLVGIVTVDDLIDVIEQEATRDIYAAGAVQPGDEDDYFQSSLFTIARRRILWLLILVLANGLTTKVIAM NDQILKEIVLLAAFIPLLIGTGGNVGAQSSTVVIRGLSTQKLKSLGAIKAVVKEAITGALLGVLMMLVVFPFAWWQGEGP LIASAVGISLISITTLAATTGAILPLLFDRMRLDPALMSSPFITTITDIAGVFIYLSTAKWLLSLSLI
Sequences:
>Translated_468_residues MNEDNLETVTSLPSDLSTRENITIQLEELLVAGNYDEAKLLLEPSQPVDIADAIGSLPLILQALAFRLLKKNEAIEVYEY LDPIVQQTLLDRLRSGEVLEIVEKMSPDDRVQLFDELPAKVVRKFLSALSPGERKVTAELLGYEPETAGRLMTTEFIDLK EMQTAAEALALVRKRAPYTETIYSLYVTDKERHLTGILSLRDLVTADPSKPIGDVMTKDVVNISTNTNQEEVARAIQRYD FLALPVVDKEKRLVGIVTVDDLIDVIEQEATRDIYAAGAVQPGDEDDYFQSSLFTIARRRILWLLILVLANGLTTKVIAM NDQILKEIVLLAAFIPLLIGTGGNVGAQSSTVVIRGLSTQKLKSLGAIKAVVKEAITGALLGVLMMLVVFPFAWWQGEGP LIASAVGISLISITTLAATTGAILPLLFDRMRLDPALMSSPFITTITDIAGVFIYLSTAKWLLSLSLI >Mature_468_residues MNEDNLETVTSLPSDLSTRENITIQLEELLVAGNYDEAKLLLEPSQPVDIADAIGSLPLILQALAFRLLKKNEAIEVYEY LDPIVQQTLLDRLRSGEVLEIVEKMSPDDRVQLFDELPAKVVRKFLSALSPGERKVTAELLGYEPETAGRLMTTEFIDLK EMQTAAEALALVRKRAPYTETIYSLYVTDKERHLTGILSLRDLVTADPSKPIGDVMTKDVVNISTNTNQEEVARAIQRYD FLALPVVDKEKRLVGIVTVDDLIDVIEQEATRDIYAAGAVQPGDEDDYFQSSLFTIARRRILWLLILVLANGLTTKVIAM NDQILKEIVLLAAFIPLLIGTGGNVGAQSSTVVIRGLSTQKLKSLGAIKAVVKEAITGALLGVLMMLVVFPFAWWQGEGP LIASAVGISLISITTLAATTGAILPLLFDRMRLDPALMSSPFITTITDIAGVFIYLSTAKWLLSLSLI
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 51353; Mature: 51353
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDNLETVTSLPSDLSTRENITIQLEELLVAGNYDEAKLLLEPSQPVDIADAIGSLPLI CCCCHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCHHHHHCCHHHH LQALAFRLLKKNEAIEVYEYLDPIVQQTLLDRLRSGEVLEIVEKMSPDDRVQLFDELPAK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH VVRKFLSALSPGERKVTAELLGYEPETAGRLMTTEFIDLKEMQTAAEALALVRKRAPYTE HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TIYSLYVTDKERHLTGILSLRDLVTADPSKPIGDVMTKDVVNISTNTNQEEVARAIQRYD HHHEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHCC FLALPVVDKEKRLVGIVTVDDLIDVIEQEATRDIYAAGAVQPGDEDDYFQSSLFTIARRR EEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH ILWLLILVLANGLTTKVIAMNDQILKEIVLLAAFIPLLIGTGGNVGAQSSTVVIRGLSTQ HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHH KLKSLGAIKAVVKEAITGALLGVLMMLVVFPFAWWQGEGPLIASAVGISLISITTLAATT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH GAILPLLFDRMRLDPALMSSPFITTITDIAGVFIYLSTAKWLLSLSLI HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEDNLETVTSLPSDLSTRENITIQLEELLVAGNYDEAKLLLEPSQPVDIADAIGSLPLI CCCCHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCHHHHHCCHHHH LQALAFRLLKKNEAIEVYEYLDPIVQQTLLDRLRSGEVLEIVEKMSPDDRVQLFDELPAK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH VVRKFLSALSPGERKVTAELLGYEPETAGRLMTTEFIDLKEMQTAAEALALVRKRAPYTE HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TIYSLYVTDKERHLTGILSLRDLVTADPSKPIGDVMTKDVVNISTNTNQEEVARAIQRYD HHHEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHCC FLALPVVDKEKRLVGIVTVDDLIDVIEQEATRDIYAAGAVQPGDEDDYFQSSLFTIARRR EEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH ILWLLILVLANGLTTKVIAMNDQILKEIVLLAAFIPLLIGTGGNVGAQSSTVVIRGLSTQ HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHH KLKSLGAIKAVVKEAITGALLGVLMMLVVFPFAWWQGEGPLIASAVGISLISITTLAATT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH GAILPLLFDRMRLDPALMSSPFITTITDIAGVFIYLSTAKWLLSLSLI HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA