| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is glgP [H]
Identifier: 78780078
GI number: 78780078
Start: 1582171
End: 1584717
Strand: Direct
Name: glgP [H]
Synonym: PMT9312_1693
Alternate gene names: 78780078
Gene position: 1582171-1584717 (Clockwise)
Preceding gene: 78780073
Following gene: 78780081
Centisome position: 92.57
GC content: 35.18
Gene sequence:
>2547_bases ATGGCTAATCCAATGAATCCCAACAAACCCTTTGATCTACGCTTGCCTACACCAGGCTGCTATCTAGATCCTGAGAAAGC TGGCATGGATTCTGATGCTGTTTTTCAAGGAATGACTGCACATCTTTTTTATACTCTTGGAAAATTAGCTACTTCCGCAA GTCCTCACGACTTGTATATGGCTCTAAGTTACGCAGTCAAAGATAGGTTGATGACAAGATATTTAGCCAGTCAAGAGGCC ATTAGAAAAAAACCACAAAAAACTGTCGCATACTTATCAGCTGAATTTTTAATAGGTCCTCAATTAAGTAATAACCTCCT TAATCTTGGCATAACACAAGAGGCAGAAGTTGCATTAAAAAGATTTGGCATTGAATCATTGGCAACTATTCTTGAGGTAG AAGAAGAGCCAGGATTAGGTAATGGTGGACTTGGCAGACTTGCTGCATGTTACATGGAATCATTAGCATCCCTTCAAGTA CCAGCAGTTGGTTACGGTATTCGTTATGAATTTGGCATATTCAACCAGTTAATTAGAGATGGTTGGCAAGTTGAAGTTAC TGACAAATGGCTCAAAGGTGGATGGCCATGGGAACTTCCACAACCAGACGAATCATGTTTTGTTGGTTTTGGAGGTAGAA CTGAAAGTTATAGAGATGATAAAGGTAACTACAGATCAAGATGGATACCTTCAGAACATGCAATTGGAGTACCTCATGAT GTTCCTGTTTTAGGATACAGAGTAAATACATGTGACAGATTAAGATTATGGAGAGCTGATGCGACTGAAAGTTTTGACTT TTATGCCTTCAATATTGGCGATTACTATGGAGCAGTAGAAGAAAAAGTTGCATCTGAAACACTTTCAAAAGTTTTATATC CCAATGATGGAACTGATGAAGGTAGAAGATTAAGGCTCAAACAGCAGCACTTTTTTGTAAGTTGTTCTCTGCAAGATATG TTGAGAAGCCTTGAAAAAAGGTCAATACCAATAACAGAGTTTTCTAAAAATTGGACAGTACAACTAAATGATACTCATCC TGCTATTGCAGTAGCTGAATTAATGCGACTTCTTATTGACCAATATCATATTGGTTGGGATAAGGCTTGGAGCATAACTA CCTCTTCAGTCGCATATACCAACCACACACTCCTTCCAGAAGCTTTAGAGAAATGGGATTTAGGTTTATTTAGTGACCTC CTTCCTCGTCATCTAGAAATTATTTATGAAATTAATTGGAGATTCCTACAACAATTAAGACTACGTTATCCTGGTGATGA CAAAATCCTTCAAAAGCTCTCAATAATTGATGAAGAAGGATCCAAATCAGTAAGAATGGCTCACCTAGCTACAATTGGAG CACATCATATAAATGGGGTTGCAGCTCTTCACTCAGATCTTATAAAAAGACAACTTCTTCCTGAATTTGCAGAACTATGG CCTGAAAAATTCTCAAATGTTACTAATGGAGTTACTCCAAGAAGATGGGTTGCTCTATCAAATCCATCATTATCTAACCT GCTAGAGGAAGAAGTTGGTCCTGATTGGATAACAAATATGGATCTTCTTAAAAAATTAGAAGAGAAAAAAGACAATACAA ATTTTTTACATAAATTTGAAGAAACTAAATTAAATGGTAAACGAAAATTAGCTAGTTTTATCCATTCAAAAACGGGCATC CTTGTTGATCCAGCAAGTTTATTTGATGTTCAAGTGAAAAGAATCCATCAATATAAAAGACAACATTTAAATGCTCTACA AATTATTGCTCAATATCTAAGAATTAAAAATGGTACGAACAAATATGAAGTGCCCAGAACAATAATATTTGGAGGTAAAG CTGCCCCAGGTTATTTCATGGCAAAACTAATGATTAGATTTATTAATGGTATTGCTGATGTAGTGAATTCTGATCCAGAT ATGGATGGTCTACTAAGAGTTGTTTTTTTACCAGACTATAATGTAAAGCTTGGTGAAATCGTTTATCCTGCAACGGATCT TTCAGAACAAATTTCAACTGCAGGGAAAGAAGCATCTGGGACTGGAAATATGAAGTTTGCTATGAATGGGGCATTAACTA TTGGAACCTTAGATGGGGCTAATGTTGAATTAAGAGATCTTGTAAAAAAAGAAAATTTCTTCCTTTTTGGAAAAACTGAA AGTGAAATTATGGATTTAAAAAATAATAATTACTCGCCCCAAACTTTCATTAACAAATGTCCGGAACTAAAAGAGGTTAT ACGTTTAATTGAAATAGGGCACTTTAGTAACGGTGATAAAGAATTATTTAAACCTTTATTAAATAGCTTAACTGGACATG ATCCATTCTTTGTAATGGCTGACTTCGAAGATTACTTAAATAAACAGGATGAAGTAAGTCAATGCTGGAATAATAAAAAA TCCTGGAATAAAATGGCATTATTAAATACCGCGAGATCAGGATATTTTTCATCAGATAGATCTATTAGAGAATACTGCAA ATCAATTTGGAAAGTATCTCCAATGCCTGTAGAAATCACATGCAATGTAGAAGAATTAACTAATTAA
Upstream 100 bases:
>100_bases CCACTTTAAGAACTATGTAAAAAAAAGCAAAAATACTCAACAAGTGTGGATCTGAAGTTACAACTAAGAAATTTTGGGAA AAATGGCTATTGTCTGATAT
Downstream 100 bases:
>100_bases TATTATTCCTATCTGGTAAATCTGGGGTTTGATGAAATAATCTATTCAAAATTATCCTATCCACATTTAATGGGTCTGGT GCTAATTCGCATGCAATCTC
Product: phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 848; Mature: 847
Protein sequence:
>848_residues MANPMNPNKPFDLRLPTPGCYLDPEKAGMDSDAVFQGMTAHLFYTLGKLATSASPHDLYMALSYAVKDRLMTRYLASQEA IRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEVALKRFGIESLATILEVEEEPGLGNGGLGRLAACYMESLASLQV PAVGYGIRYEFGIFNQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWIPSEHAIGVPHD VPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDEGRRLRLKQQHFFVSCSLQDM LRSLEKRSIPITEFSKNWTVQLNDTHPAIAVAELMRLLIDQYHIGWDKAWSITTSSVAYTNHTLLPEALEKWDLGLFSDL LPRHLEIIYEINWRFLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLPEFAELW PEKFSNVTNGVTPRRWVALSNPSLSNLLEEEVGPDWITNMDLLKKLEEKKDNTNFLHKFEETKLNGKRKLASFIHSKTGI LVDPASLFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGTNKYEVPRTIIFGGKAAPGYFMAKLMIRFINGIADVVNSDPD MDGLLRVVFLPDYNVKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFFLFGKTE SEIMDLKNNNYSPQTFINKCPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGHDPFFVMADFEDYLNKQDEVSQCWNNKK SWNKMALLNTARSGYFSSDRSIREYCKSIWKVSPMPVEITCNVEELTN
Sequences:
>Translated_848_residues MANPMNPNKPFDLRLPTPGCYLDPEKAGMDSDAVFQGMTAHLFYTLGKLATSASPHDLYMALSYAVKDRLMTRYLASQEA IRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEVALKRFGIESLATILEVEEEPGLGNGGLGRLAACYMESLASLQV PAVGYGIRYEFGIFNQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWIPSEHAIGVPHD VPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDEGRRLRLKQQHFFVSCSLQDM LRSLEKRSIPITEFSKNWTVQLNDTHPAIAVAELMRLLIDQYHIGWDKAWSITTSSVAYTNHTLLPEALEKWDLGLFSDL LPRHLEIIYEINWRFLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLPEFAELW PEKFSNVTNGVTPRRWVALSNPSLSNLLEEEVGPDWITNMDLLKKLEEKKDNTNFLHKFEETKLNGKRKLASFIHSKTGI LVDPASLFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGTNKYEVPRTIIFGGKAAPGYFMAKLMIRFINGIADVVNSDPD MDGLLRVVFLPDYNVKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFFLFGKTE SEIMDLKNNNYSPQTFINKCPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGHDPFFVMADFEDYLNKQDEVSQCWNNKK SWNKMALLNTARSGYFSSDRSIREYCKSIWKVSPMPVEITCNVEELTN >Mature_847_residues ANPMNPNKPFDLRLPTPGCYLDPEKAGMDSDAVFQGMTAHLFYTLGKLATSASPHDLYMALSYAVKDRLMTRYLASQEAI RKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEVALKRFGIESLATILEVEEEPGLGNGGLGRLAACYMESLASLQVP AVGYGIRYEFGIFNQLIRDGWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWIPSEHAIGVPHDV PVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDEGRRLRLKQQHFFVSCSLQDML RSLEKRSIPITEFSKNWTVQLNDTHPAIAVAELMRLLIDQYHIGWDKAWSITTSSVAYTNHTLLPEALEKWDLGLFSDLL PRHLEIIYEINWRFLQQLRLRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLPEFAELWP EKFSNVTNGVTPRRWVALSNPSLSNLLEEEVGPDWITNMDLLKKLEEKKDNTNFLHKFEETKLNGKRKLASFIHSKTGIL VDPASLFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGTNKYEVPRTIIFGGKAAPGYFMAKLMIRFINGIADVVNSDPDM DGLLRVVFLPDYNVKLGEIVYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFFLFGKTES EIMDLKNNNYSPQTFINKCPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGHDPFFVMADFEDYLNKQDEVSQCWNNKKS WNKMALLNTARSGYFSSDRSIREYCKSIWKVSPMPVEITCNVEELTN
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=812, Percent_Identity=47.6600985221675, Blast_Score=746, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=802, Percent_Identity=46.5087281795511, Blast_Score=739, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=822, Percent_Identity=45.4987834549878, Blast_Score=718, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=705, Percent_Identity=48.6524822695035, Blast_Score=702, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=46.6165413533835, Blast_Score=646, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=785, Percent_Identity=45.7324840764331, Blast_Score=719, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=829, Percent_Identity=44.6320868516285, Blast_Score=716, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=820, Percent_Identity=47.4390243902439, Blast_Score=756, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=820, Percent_Identity=47.4390243902439, Blast_Score=755, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=832, Percent_Identity=44.4711538461538, Blast_Score=659, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=809, Percent_Identity=45.2410383189122, Blast_Score=716, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=809, Percent_Identity=45.2410383189122, Blast_Score=716, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96250; Mature: 96119
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPMNPNKPFDLRLPTPGCYLDPEKAGMDSDAVFQGMTAHLFYTLGKLATSASPHDLYM CCCCCCCCCCEEEECCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALSYAVKDRLMTRYLASQEAIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEVALK HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEECCCCCCCCEECCCCCHHHHHHH RFGIESLATILEVEEEPGLGNGGLGRLAACYMESLASLQVPAVGYGIRYEFGIFNQLIRD HHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHC GWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWIPSEHAIGVPHD CCEEEEEHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDE CCEEEEEECCHHHHEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC GRRLRLKQQHFFVSCSLQDMLRSLEKRSIPITEFSKNWTVQLNDTHPAIAVAELMRLLID CHHEEEEEHHEEEEECHHHHHHHHHHCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHH QYHIGWDKAWSITTSSVAYTNHTLLPEALEKWDLGLFSDLLPRHLEIIYEINWRFLQQLR HHCCCCCCCEEEEECCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHH LRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLPEFAELW CCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEKFSNVTNGVTPRRWVALSNPSLSNLLEEEVGPDWITNMDLLKKLEEKKDNTNFLHKFE HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH ETKLNGKRKLASFIHSKTGILVDPASLFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGTN HHHCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KYEVPRTIIFGGKAAPGYFMAKLMIRFINGIADVVNSDPDMDGLLRVVFLPDYNVKLGEI CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCE VYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFFLFGKTE EECCCCHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHCCEEEEECCH SEIMDLKNNNYSPQTFINKCPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGHDPFFVMA HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEE DFEDYLNKQDEVSQCWNNKKSWNKMALLNTARSGYFSSDRSIREYCKSIWKVSPMPVEIT CHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEE CNVEELTN ECHHHHCC >Mature Secondary Structure ANPMNPNKPFDLRLPTPGCYLDPEKAGMDSDAVFQGMTAHLFYTLGKLATSASPHDLYM CCCCCCCCCEEEECCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALSYAVKDRLMTRYLASQEAIRKKPQKTVAYLSAEFLIGPQLSNNLLNLGITQEAEVALK HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEECCCCCCCCEECCCCCHHHHHHH RFGIESLATILEVEEEPGLGNGGLGRLAACYMESLASLQVPAVGYGIRYEFGIFNQLIRD HHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHC GWQVEVTDKWLKGGWPWELPQPDESCFVGFGGRTESYRDDKGNYRSRWIPSEHAIGVPHD CCEEEEEHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPVLGYRVNTCDRLRLWRADATESFDFYAFNIGDYYGAVEEKVASETLSKVLYPNDGTDE CCEEEEEECCHHHHEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC GRRLRLKQQHFFVSCSLQDMLRSLEKRSIPITEFSKNWTVQLNDTHPAIAVAELMRLLID CHHEEEEEHHEEEEECHHHHHHHHHHCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHH QYHIGWDKAWSITTSSVAYTNHTLLPEALEKWDLGLFSDLLPRHLEIIYEINWRFLQQLR HHCCCCCCCEEEEECCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHH LRYPGDDKILQKLSIIDEEGSKSVRMAHLATIGAHHINGVAALHSDLIKRQLLPEFAELW CCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEKFSNVTNGVTPRRWVALSNPSLSNLLEEEVGPDWITNMDLLKKLEEKKDNTNFLHKFE HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH ETKLNGKRKLASFIHSKTGILVDPASLFDVQVKRIHQYKRQHLNALQIIAQYLRIKNGTN HHHCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KYEVPRTIIFGGKAAPGYFMAKLMIRFINGIADVVNSDPDMDGLLRVVFLPDYNVKLGEI CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCE VYPATDLSEQISTAGKEASGTGNMKFAMNGALTIGTLDGANVELRDLVKKENFFLFGKTE EECCCCHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHCCEEEEECCH SEIMDLKNNNYSPQTFINKCPELKEVIRLIEIGHFSNGDKELFKPLLNSLTGHDPFFVMA HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEE DFEDYLNKQDEVSQCWNNKKSWNKMALLNTARSGYFSSDRSIREYCKSIWKVSPMPVEIT CHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEE CNVEELTN ECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]