Click here to switch to the map view.

The map label for this gene is 78780045

Identifier: 78780045

GI number: 78780045

Start: 1547788

End: 1548159

Strand: Reverse

Name: 78780045

Synonym: PMT9312_1660

Alternate gene names: NA

Gene position: 1548159-1547788 (Counterclockwise)

Preceding gene: 78780047

Following gene: 78780043

Centisome position: 90.58

GC content: 38.98

Gene sequence:

>372_bases
ATGTTCATGAGTGACAACACTTCTGAGTCAAATCAAGACTCTGGCTCCGATACAAGCGCCGACACCAAAAGTTTTTCAGA
GAAGTATTCTGATGTAATGGGAAAAGTCAACCAAACACTTGGAAATGTTGATTGGACCCAAATGGGAAAATACGGTAAAG
CAGCAGGCATTATTGCCGTTGTAATTATCGCCCAAATAATAATCAAAGTTGTCATTGACACGATAAACTTTTTCCCAATT
CTTCCAGGTTTACTGGAACTTTTAGGCGTATTTGTTGTTGGGCAATGGAGCTGGCAGAATCTTCGTACCAGTGAAAATCG
TGAAGCTGTTTTAGATAAGGTACAAAATCTTAAGAAGACATATTTAGGGTAG

Upstream 100 bases:

>100_bases
AATACAAAATGTTTCGGTTCGGAATTTTGCACAACAAAAAGGTAGTCAATTGGCATTTTTTCCGATACTGTCTGGTTCAT
ATATATAATTTGCAGCCTGA

Downstream 100 bases:

>100_bases
TTAAAGATTACATATTGAGTATTGCTTGTACGTAATCTTTAACTTGTTTTAAGTAACCTCCTCCAAACATATTGGCGTGA
TTCAATATGTGATAAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MFMSDNTSESNQDSGSDTSADTKSFSEKYSDVMGKVNQTLGNVDWTQMGKYGKAAGIIAVVIIAQIIIKVVIDTINFFPI
LPGLLELLGVFVVGQWSWQNLRTSENREAVLDKVQNLKKTYLG

Sequences:

>Translated_123_residues
MFMSDNTSESNQDSGSDTSADTKSFSEKYSDVMGKVNQTLGNVDWTQMGKYGKAAGIIAVVIIAQIIIKVVIDTINFFPI
LPGLLELLGVFVVGQWSWQNLRTSENREAVLDKVQNLKKTYLG
>Mature_123_residues
MFMSDNTSESNQDSGSDTSADTKSFSEKYSDVMGKVNQTLGNVDWTQMGKYGKAAGIIAVVIIAQIIIKVVIDTINFFPI
LPGLLELLGVFVVGQWSWQNLRTSENREAVLDKVQNLKKTYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13580; Mature: 13580

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMSDNTSESNQDSGSDTSADTKSFSEKYSDVMGKVNQTLGNVDWTQMGKYGKAAGIIAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH
VIIAQIIIKVVIDTINFFPILPGLLELLGVFVVGQWSWQNLRTSENREAVLDKVQNLKKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHH
YLG
HCC
>Mature Secondary Structure
MFMSDNTSESNQDSGSDTSADTKSFSEKYSDVMGKVNQTLGNVDWTQMGKYGKAAGIIAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH
VIIAQIIIKVVIDTINFFPILPGLLELLGVFVVGQWSWQNLRTSENREAVLDKVQNLKKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHH
YLG
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA