| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is fusA [H]
Identifier: 78779985
GI number: 78779985
Start: 1498186
End: 1500261
Strand: Reverse
Name: fusA [H]
Synonym: PMT9312_1601
Alternate gene names: 78779985
Gene position: 1500261-1498186 (Counterclockwise)
Preceding gene: 78779986
Following gene: 78779984
Centisome position: 87.78
GC content: 39.69
Gene sequence:
>2076_bases TTGGCACGCGACTTTCCCCTAGAACGAGTTAGGAATATAGGTATAGCCGCTCATATTGACGCAGGGAAGACAACAACAAC TGAAAGAATCTTATTTTATTCAGGTGTTGTTCACAAGATTGGAGAAGTTCATGATGGTGCTGCCGTAACAGATTGGATGG CCCAAGAAAGAGAACGAGGCATAACTATTACTGCTGCTGCAATATCTACAAGTTGGCAAGATCACAGAATCAATATTATT GATACTCCAGGACACGTTGATTTTACTATTGAAGTGGAAAGATCAATGAGAGTCTTAGATGGAGTTATTGCTGTATTTTG TGCTGTAGGAGGAGTTCAGCCTCAATCTGAAACAGTTTGGCGACAAGCAGATAGATACTCTGTTCCAAGAATGGTTTTTG TAAACAAAATGGACCGGACTGGCGCAGATTTTTTAAAAGTTAATAATCAAATTAAAGACCGACTAAAAGCAAATGCACTT CCTATTCAGCTACCTATTGGAGCTGAAGGAGATCTCACGGGCATTATTGATTTGGTTGCTAACAAAGCATATCTTTACAA AAATGACTTAGGTACTGATATTCAGGAAGCACCAATTCCATCTGAAATGGATGATGAAGCTGCTGAGTGGAGATATAAAT TGATGGAGAGTGTTGCAGAAAATGATGAAGAGCTAATAGAAACATTTCTCGAAACAGGAGAATTATCTGAAGAACAACTT AAAAAAGGGATAAGAGAAGGGGTTTTAAAACATGGACTAGTTCCTGTATTGTGTGGGTCAGCCTTTAAGAACAAAGGTGT CCAACTTGTTTTAGACGCTGTTGTCGATTATTTGCCAGCTCCAGTTGATGTGAAGCCAATTCAAGGTGTTTTACCAAGTG GCAAAGAAGATGTTAGACCTTCTGATGATAATGCCCCTTTCAGTGCATTAGCTTTCAAAGTGATGTCAGATCCCTATGGG AAATTAACTTTTGTAAGGATGTATTCGGGTGTTCTTTCAAAGGGAAGTTATGTCATGAATTCTACTAAAGATGCTAAAGA GAGAATTTCTAGATTAGTAATTTTAAAGGCTGATGAAAGAGAGGAGGTTGATGAATTGAGAGCTGGAGATTTAGGAGCTG TATTAGGACTTAAGAACACTACAACTGGTGACACTTTATGTAATACAGAAGATCCTATAGTTTTAGAGACCTTGTTTATC CCCGAACCAGTTATCTCTGTGGCCGTTGAGCCAAAAACCAAAGGTGATATGGAAAAATTATCAAAAGCTTTAACTGCTTT GTCCGAAGAGGATCCAACCTTTAGGGTAAGTACTGATCCGGAGACAAATCAAACTGTTATTGCTGGTATGGGCGAGTTGC ACCTAGAAATCCTTGTAGACAGAATGTTAAGGGAGTTTAAAGTTGAAGCTAATATTGGAGCTCCTCAGGTTTCATATAGA GAGACCATCAGGTCTAGCTCTAAAGGTGAAGGTAAATATGCAAGACAAACTGGAGGAAAAGGTCAATATGGTCATGTAAT AATTGAAATGGAACCTGCTGAAGTTGGTAAAGGGTTTGAATTTGTTAACAAAATTGTTGGTGGAGCTGTACCGAAAGAGT ACATTGGTCCTGCATCTAATGGAATGAAAGAAACCTGTGAATCTGGTGTTCTTGCCGGTTATCCACTCATTGATGTAAAA GTAACACTAGTCGATGGTTCATTCCACGATGTAGACTCATCAGAAATGGCCTTCAAAATTGCAGGTTCCATGGCTTTTAA AGATGGGGTTAAAAAATGCAACCCTGTCCTTTTAGAGCCTATGATGAAAGTTGAGGTCGAAAGTCCTGACGACTTTCTTG GATCTGTAATTGGTGATCTCTCCTCTAGAAGAGGTCAAGTAGAAGGACAATCTGTTGATGATGGATTGTCTAAGGTACAG GCCAAAGTGCCCTTAGCCGAAATGTTCGGTTATGCCACTCAACTCCGATCAATGACTCAAGGTCGGGGTATATTCTCAAT GGAGTTCGCAAATTATGAGGAAGTCCCTCGTAATGTTGCTGAAGCTATCATTACCAAGAATCAGGGCAACTCCTGA
Upstream 100 bases:
>100_bases TAATTTCGTCAAAAAGGTACTGAAGTAGTTTATTATTATAAAAGTTTACTTTTAGGGTGAACTATACTTATCAAAAATTA TTGTATTTGGAGCTTTAAAA
Downstream 100 bases:
>100_bases TCTCTAAACTAAAACACTCTTAAACCCTCGATTCTTTAATTCAAAATGGCTCGCGAGAAGTTCGAAAGGAACAAACCACA TGTCAACATAGGTACTATTG
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERGITITAAAISTSWQDHRINII DTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVNNQIKDRLKANAL PIQLPIGAEGDLTGIIDLVANKAYLYKNDLGTDIQEAPIPSEMDDEAAEWRYKLMESVAENDEELIETFLETGELSEEQL KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPSGKEDVRPSDDNAPFSALAFKVMSDPYG KLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADEREEVDELRAGDLGAVLGLKNTTTGDTLCNTEDPIVLETLFI PEPVISVAVEPKTKGDMEKLSKALTALSEEDPTFRVSTDPETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR ETIRSSSKGEGKYARQTGGKGQYGHVIIEMEPAEVGKGFEFVNKIVGGAVPKEYIGPASNGMKETCESGVLAGYPLIDVK VTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQ AKVPLAEMFGYATQLRSMTQGRGIFSMEFANYEEVPRNVAEAIITKNQGNS
Sequences:
>Translated_691_residues MARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERGITITAAAISTSWQDHRINII DTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVNNQIKDRLKANAL PIQLPIGAEGDLTGIIDLVANKAYLYKNDLGTDIQEAPIPSEMDDEAAEWRYKLMESVAENDEELIETFLETGELSEEQL KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPSGKEDVRPSDDNAPFSALAFKVMSDPYG KLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADEREEVDELRAGDLGAVLGLKNTTTGDTLCNTEDPIVLETLFI PEPVISVAVEPKTKGDMEKLSKALTALSEEDPTFRVSTDPETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR ETIRSSSKGEGKYARQTGGKGQYGHVIIEMEPAEVGKGFEFVNKIVGGAVPKEYIGPASNGMKETCESGVLAGYPLIDVK VTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQ AKVPLAEMFGYATQLRSMTQGRGIFSMEFANYEEVPRNVAEAIITKNQGNS >Mature_690_residues ARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERGITITAAAISTSWQDHRINIID TPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVNNQIKDRLKANALP IQLPIGAEGDLTGIIDLVANKAYLYKNDLGTDIQEAPIPSEMDDEAAEWRYKLMESVAENDEELIETFLETGELSEEQLK KGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPSGKEDVRPSDDNAPFSALAFKVMSDPYGK LTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADEREEVDELRAGDLGAVLGLKNTTTGDTLCNTEDPIVLETLFIP EPVISVAVEPKTKGDMEKLSKALTALSEEDPTFRVSTDPETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYRE TIRSSSKGEGKYARQTGGKGQYGHVIIEMEPAEVGKGFEFVNKIVGGAVPKEYIGPASNGMKETCESGVLAGYPLIDVKV TLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQA KVPLAEMFGYATQLRSMTQGRGIFSMEFANYEEVPRNVAEAIITKNQGNS
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=697, Percent_Identity=43.9024390243902, Blast_Score=574, Evalue=1e-164, Organism=Homo sapiens, GI19923640, Length=731, Percent_Identity=40.4924760601915, Blast_Score=489, Evalue=1e-138, Organism=Homo sapiens, GI25306287, Length=730, Percent_Identity=38.3561643835616, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI25306283, Length=446, Percent_Identity=44.6188340807175, Blast_Score=331, Evalue=2e-90, Organism=Homo sapiens, GI157426893, Length=156, Percent_Identity=38.4615384615385, Blast_Score=104, Evalue=4e-22, Organism=Homo sapiens, GI4503483, Length=484, Percent_Identity=23.9669421487603, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=38.0597014925373, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310132016, Length=118, Percent_Identity=38.135593220339, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI310110807, Length=118, Percent_Identity=38.135593220339, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI310123363, Length=118, Percent_Identity=38.135593220339, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI217272892, Length=138, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI217272894, Length=138, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1789738, Length=699, Percent_Identity=60.8011444921316, Blast_Score=866, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=473, Percent_Identity=28.9640591966173, Blast_Score=177, Evalue=3e-45, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=41.1428571428571, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1788922, Length=152, Percent_Identity=36.1842105263158, Blast_Score=90, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17533571, Length=679, Percent_Identity=42.2680412371134, Blast_Score=533, Evalue=1e-151, Organism=Caenorhabditis elegans, GI17556745, Length=692, Percent_Identity=28.3236994219653, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17506493, Length=486, Percent_Identity=26.3374485596708, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557151, Length=181, Percent_Identity=37.0165745856354, Blast_Score=105, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71988819, Length=134, Percent_Identity=31.3432835820896, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71988811, Length=134, Percent_Identity=31.3432835820896, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17552882, Length=135, Percent_Identity=34.8148148148148, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=690, Percent_Identity=42.8985507246377, Blast_Score=574, Evalue=1e-164, Organism=Saccharomyces cerevisiae, GI6322359, Length=794, Percent_Identity=33.8790931989924, Blast_Score=396, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6324707, Length=474, Percent_Identity=24.4725738396624, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6320593, Length=474, Percent_Identity=24.4725738396624, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323320, Length=152, Percent_Identity=37.5, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=144, Percent_Identity=32.6388888888889, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582462, Length=694, Percent_Identity=43.9481268011527, Blast_Score=592, Evalue=1e-169, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=32.6896551724138, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24585711, Length=486, Percent_Identity=23.8683127572016, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24585713, Length=486, Percent_Identity=23.8683127572016, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24585709, Length=486, Percent_Identity=23.8683127572016, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI78706572, Length=160, Percent_Identity=37.5, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=36.8794326241135, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI21357743, Length=135, Percent_Identity=31.8518518518519, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75521; Mature: 75390
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERG CCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ITITAAAISTSWQDHRINIIDTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVW EEEEEEEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RQADRYSVPRMVFVNKMDRTGADFLKVNNQIKDRLKANALPIQLPIGAEGDLTGIIDLVA HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH NKAYLYKNDLGTDIQEAPIPSEMDDEAAEWRYKLMESVAENDEELIETFLETGELSEEQL CCCEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPSGKEDVRP HHHHHHHHHHHCCHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SDDNAPFSALAFKVMSDPYGKLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADER CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEECCCHHHHHHHHEEEEEECCCH EEVDELRAGDLGAVLGLKNTTTGDTLCNTEDPIVLETLFIPEPVISVAVEPKTKGDMEKL HHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHEEEECCCCCCCHHHH SKALTALSEEDPTFRVSTDPETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR HHHHHHHCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ETIRSSSKGEGKYARQTGGKGQYGHVIIEMEPAEVGKGFEFVNKIVGGAVPKEYIGPASN HHHHCCCCCCCCHHHHCCCCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHCCCCCC GMKETCESGVLAGYPLIDVKVTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEP CHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHCC MMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQAKVPLAEMFGYATQLRSMTQ HHEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GRGIFSMEFANYEEVPRNVAEAIITKNQGNS CCCEEEEECCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARDFPLERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERG CCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ITITAAAISTSWQDHRINIIDTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVW EEEEEEEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RQADRYSVPRMVFVNKMDRTGADFLKVNNQIKDRLKANALPIQLPIGAEGDLTGIIDLVA HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH NKAYLYKNDLGTDIQEAPIPSEMDDEAAEWRYKLMESVAENDEELIETFLETGELSEEQL CCCEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH KKGIREGVLKHGLVPVLCGSAFKNKGVQLVLDAVVDYLPAPVDVKPIQGVLPSGKEDVRP HHHHHHHHHHHCCHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SDDNAPFSALAFKVMSDPYGKLTFVRMYSGVLSKGSYVMNSTKDAKERISRLVILKADER CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEECCCHHHHHHHHEEEEEECCCH EEVDELRAGDLGAVLGLKNTTTGDTLCNTEDPIVLETLFIPEPVISVAVEPKTKGDMEKL HHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHEEEECCCCCCCHHHH SKALTALSEEDPTFRVSTDPETNQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR HHHHHHHCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ETIRSSSKGEGKYARQTGGKGQYGHVIIEMEPAEVGKGFEFVNKIVGGAVPKEYIGPASN HHHHCCCCCCCCHHHHCCCCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHCCCCCC GMKETCESGVLAGYPLIDVKVTLVDGSFHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEP CHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHCC MMKVEVESPDDFLGSVIGDLSSRRGQVEGQSVDDGLSKVQAKVPLAEMFGYATQLRSMTQ HHEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GRGIFSMEFANYEEVPRNVAEAIITKNQGNS CCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA