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The map label for this gene is ytfP [H]

Identifier: 78779851

GI number: 78779851

Start: 1376042

End: 1377289

Strand: Reverse

Name: ytfP [H]

Synonym: PMT9312_1467

Alternate gene names: 78779851

Gene position: 1377289-1376042 (Counterclockwise)

Preceding gene: 78779855

Following gene: 78779850

Centisome position: 80.58

GC content: 31.57

Gene sequence:

>1248_bases
TTGCAGGATAAGTTTTTGGAACCTTATGATTTAGCAGTTGTAGGAGGTGGTGCTGCTGGTTTCATGACGGCAATAACTGC
TGCTGAAAATGGAGTCAAAAGAATAATAATTTTAGAAGGGACTTCAAAACTTATGGAGAAAATAAGGATTAGTGGAGGTG
GAAGATGTAACGTTACTAATGCAACATGGATACCAAATGAACTAGTTGAGAATTATCCCAGAGGTGGTATTCAGCTATTG
GAATCATTTAACCGTTTTGCTTCAGGAGATGTATTTGATTGGTTTGAGAAAAAAGGTTTGAAATTAAAAATTGAAGAAGA
TCTAAGAGTATTCCCAGCGTCAAATTCTTCTTCGGATGTTATTGAGTGCTTGAGAAAAAGTGCTTTATCAAAAAATGTAG
AGATATTAACAAAATGTTTTGTGAAGGAAATTTTAAAAACTCCAGATAATATATTTAAAATTTTTAGTCTTAAAGAAGAA
ACGGTAATTACAAAAAATATTATTCTTTCTACTGGAGGTCACCCCAGCGGGTATAAATTGGCTCAAAATCTTGGCCACAG
TATTGTTAAACCAGTACCATCACTTTTTACTTTTTCCACAAAAGAACCAAATTTAGATGAATGTAGTGGCGTATCGATAA
AAGGTATAGATATTGAAATTAAATTAAATAACAAGACCTTTCAAAACAGAGGAGATTTACTTATTACTCATTGGGGTTTT
AGTGGACCAGCGGTGTTAAAACTTTCATCAATTGCAGCAAGGGAACTTTTTAGCCAAAAATATAAATTCAACCTAATCAT
TAAATGGTCATTTTTAAGTTATGAGGAGTTGAAAGAAAAAATTAATTTTTTAAGATTAAATAAAGGTAAGGTAAATTTAA
TAAATAGTAGACCGGTTTCATTATTAACAAAAAGATTATGGATTTTTTTATTAAATAAAATAGGCATTGATAAAGAGAAA
AAGTGGGCTGATTTAATGGCTTATGAAAGAGACAAAATGATAAATACTCTTATGCGGGATAAATATATAATTTCGGGCAA
AGGACCATTTGGAGAGGAATTTGTTACTTCTGGAGGCGTAAAAATTAATGAAGTTAATTTTAAAACTATGGAGAGCTTAA
TTTGCCCAGGATTATATTTTTCTGGAGAAGTTTTAGATGTTGATGGGATTACAGGTGGATTTAATTTTCAACATTGTTGG
ACAAGTGGATGGATCGCTGGGATGGCAGTCTCAAAGTTAAATCAATAA

Upstream 100 bases:

>100_bases
GCTATTTATTAAGGATTTAATTATGTTTTTTAAATATTTTTTATAGTTTTTTGGAATAATTTTTCTTGGTATCTCCTTGC
TATTATTAGATTAGGAAATA

Downstream 100 bases:

>100_bases
GTAACAAATCAATAAGTTTATCTTTTTTTTATTAAGTATTAGACGGAAAAAGTTTTTTGAAGAAACTTTAATTTTAAAGT
TTTAATTAATTGGTGAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MQDKFLEPYDLAVVGGGAAGFMTAITAAENGVKRIIILEGTSKLMEKIRISGGGRCNVTNATWIPNELVENYPRGGIQLL
ESFNRFASGDVFDWFEKKGLKLKIEEDLRVFPASNSSSDVIECLRKSALSKNVEILTKCFVKEILKTPDNIFKIFSLKEE
TVITKNIILSTGGHPSGYKLAQNLGHSIVKPVPSLFTFSTKEPNLDECSGVSIKGIDIEIKLNNKTFQNRGDLLITHWGF
SGPAVLKLSSIAARELFSQKYKFNLIIKWSFLSYEELKEKINFLRLNKGKVNLINSRPVSLLTKRLWIFLLNKIGIDKEK
KWADLMAYERDKMINTLMRDKYIISGKGPFGEEFVTSGGVKINEVNFKTMESLICPGLYFSGEVLDVDGITGGFNFQHCW
TSGWIAGMAVSKLNQ

Sequences:

>Translated_415_residues
MQDKFLEPYDLAVVGGGAAGFMTAITAAENGVKRIIILEGTSKLMEKIRISGGGRCNVTNATWIPNELVENYPRGGIQLL
ESFNRFASGDVFDWFEKKGLKLKIEEDLRVFPASNSSSDVIECLRKSALSKNVEILTKCFVKEILKTPDNIFKIFSLKEE
TVITKNIILSTGGHPSGYKLAQNLGHSIVKPVPSLFTFSTKEPNLDECSGVSIKGIDIEIKLNNKTFQNRGDLLITHWGF
SGPAVLKLSSIAARELFSQKYKFNLIIKWSFLSYEELKEKINFLRLNKGKVNLINSRPVSLLTKRLWIFLLNKIGIDKEK
KWADLMAYERDKMINTLMRDKYIISGKGPFGEEFVTSGGVKINEVNFKTMESLICPGLYFSGEVLDVDGITGGFNFQHCW
TSGWIAGMAVSKLNQ
>Mature_415_residues
MQDKFLEPYDLAVVGGGAAGFMTAITAAENGVKRIIILEGTSKLMEKIRISGGGRCNVTNATWIPNELVENYPRGGIQLL
ESFNRFASGDVFDWFEKKGLKLKIEEDLRVFPASNSSSDVIECLRKSALSKNVEILTKCFVKEILKTPDNIFKIFSLKEE
TVITKNIILSTGGHPSGYKLAQNLGHSIVKPVPSLFTFSTKEPNLDECSGVSIKGIDIEIKLNNKTFQNRGDLLITHWGF
SGPAVLKLSSIAARELFSQKYKFNLIIKWSFLSYEELKEKINFLRLNKGKVNLINSRPVSLLTKRLWIFLLNKIGIDKEK
KWADLMAYERDKMINTLMRDKYIISGKGPFGEEFVTSGGVKINEVNFKTMESLICPGLYFSGEVLDVDGITGGFNFQHCW
TSGWIAGMAVSKLNQ

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=407, Percent_Identity=29.97542997543, Blast_Score=136, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46452; Mature: 46452

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKFLEPYDLAVVGGGAAGFMTAITAAENGVKRIIILEGTSKLMEKIRISGGGRCNVTN
CCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCEEECCC
ATWIPNELVENYPRGGIQLLESFNRFASGDVFDWFEKKGLKLKIEEDLRVFPASNSSSDV
CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCEEEECCCCCHHH
IECLRKSALSKNVEILTKCFVKEILKTPDNIFKIFSLKEETVITKNIILSTGGHPSGYKL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEHHCCCCHHEEEEEEEEECCCCCCHHHH
AQNLGHSIVKPVPSLFTFSTKEPNLDECSGVSIKGIDIEIKLNNKTFQNRGDLLITHWGF
HHHCCHHHHHCCHHHEEECCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCCEEEEECCC
SGPAVLKLSSIAARELFSQKYKFNLIIKWSFLSYEELKEKINFLRLNKGKVNLINSRPVS
CCCHHEEHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHEEEECCCEEEEECCCCHH
LLTKRLWIFLLNKIGIDKEKKWADLMAYERDKMINTLMRDKYIISGKGPFGEEFVTSGGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCE
KINEVNFKTMESLICPGLYFSGEVLDVDGITGGFNFQHCWTSGWIAGMAVSKLNQ
EEEECCHHHHHHHHCCCCEECCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MQDKFLEPYDLAVVGGGAAGFMTAITAAENGVKRIIILEGTSKLMEKIRISGGGRCNVTN
CCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCEEECCC
ATWIPNELVENYPRGGIQLLESFNRFASGDVFDWFEKKGLKLKIEEDLRVFPASNSSSDV
CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCEEEECCCCCHHH
IECLRKSALSKNVEILTKCFVKEILKTPDNIFKIFSLKEETVITKNIILSTGGHPSGYKL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEHHCCCCHHEEEEEEEEECCCCCCHHHH
AQNLGHSIVKPVPSLFTFSTKEPNLDECSGVSIKGIDIEIKLNNKTFQNRGDLLITHWGF
HHHCCHHHHHCCHHHEEECCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCCEEEEECCC
SGPAVLKLSSIAARELFSQKYKFNLIIKWSFLSYEELKEKINFLRLNKGKVNLINSRPVS
CCCHHEEHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHEEEECCCEEEEECCCCHH
LLTKRLWIFLLNKIGIDKEKKWADLMAYERDKMINTLMRDKYIISGKGPFGEEFVTSGGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCE
KINEVNFKTMESLICPGLYFSGEVLDVDGITGGFNFQHCWTSGWIAGMAVSKLNQ
EEEECCHHHHHHHHCCCCEECCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]