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The map label for this gene is 78779850

Identifier: 78779850

GI number: 78779850

Start: 1375190

End: 1375939

Strand: Reverse

Name: 78779850

Synonym: PMT9312_1466

Alternate gene names: NA

Gene position: 1375939-1375190 (Counterclockwise)

Preceding gene: 78779851

Following gene: 78779849

Centisome position: 80.5

GC content: 32.27

Gene sequence:

>750_bases
ATGCAGAATCTTGTGTCAAAAAAAGAAGATGAGGAAAGAAGATTAAAATCTTTAGCAGAATATAGAATTTTGGGAACCAA
GCCAGAATCATGTTATGACGATATTACAAAAATTGCGGCTGCAACTTGTAATGTGCCTATTTCTTTAATGACTTTGGTTG
ACAAAGATAGACAATGGTTTAAGTCCAAAGTTGGACTTCAAATATCAGAAACTAGAAGAGATTGGTCTTTTTGTACCCAT
GCAATAAAAGAAAATAGTCCACTAATTATTCATGATGCTTTCCAAGATGAAAGATTTATAAATAATCCATTGGTAACAGG
AGACCCAAAGATTCGTTTTTATGCAGGTTTCCCCCTAAAAACTAGTGATGGTAATAAGCTTGGAACTCTTTGTGTAATAG
ACAGAAAGCCAGGAAATCTAACTACACAACAATTCAACATCATGGAATTATTATCCAGGCAAATAGTTTCATTCTTAGAG
CTTAGAAAAAAGTCATTAAACTTGCTAGATGCATTGTCTAATTTGCATAAACAGGAAGGGATTTTATCTGTATGTTCATA
TTGCAGAGAAGTAAAAAATAAGGAGGGAGATTGGATGCATTTGGAAAAATATCTTTCAAAAATTAGTGATATTAGATTTA
GTCATGGGGTTTGTGATAATTGCATGGAAAAACATTTCCCTGATGTAATCGAAGTATGGAATAAAAAGGATTTTTTTGAA
GATGGTCAAAAAAGGTATTTAGAGTCTTAG

Upstream 100 bases:

>100_bases
AACAAATCAATAAGTTTATCTTTTTTTTATTAAGTATTAGACGGAAAAAGTTTTTTGAAGAAACTTTAATTTTAAAGTTT
TAATTAATTGGTGAAGATTA

Downstream 100 bases:

>100_bases
CTTAAATTCAATACCTTGCTTTTAAGTTATTAATCTATTTCTAAACAAATTCTTTATTTGGTGGTTAGTATTGTATAAAT
TTTGACTAGAAAATGTTATT

Product: GAF domain-containing protein

Products: NA

Alternate protein names: Signal Transduction Histidine Kinase; Diguanylate Cyclase; Multi-Sensor Hybrid Histidine Kinase; GAF Sensor Protein; Two-Component Hybrid Sensor And Regulator; Multi-Sensor Signal Transduction Histidine Kinase; GGDEF Domain-Containing Protein; Diguanylate Cyclase With PAS/PAC Sensor; Sensor Protein; GAF Domain-Containing Protein; Histidine Kinase Response Regulator Hybrid Protein; Two-Component Sensor Histidine Kinase; Two-Component System Sensor Histidine Kinase; PAS Sensor Protein; GGDEF Domain Protein; GAF Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Sensory Box/GGDEF Family Protein; Sensor Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; GAF Sensor Diguanylate Cyclase; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Histidine Kinase-Response Regulator Hybrid Protein; Diguanylate Phosphodiesterase With GAF Sensor; Sensory Transduction Histidine Kinase; PAS/PAC Sensor Protein; Histidine Kinase/Response Regulator Hybrid Protein; ATPase Histidine Kinase- DNA Gyrase B- And; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; GAF Sensor-Containing Diguanylate Cyclase; Pas/Pac Sensor Protein; Stage II Sporulation E Family Protein; GGDEF GAF Signalling Protein; Sensory Histidine Protein Kinase; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Protein Containing GAF Domain; GAF Domain Protein; Adenylate Cyclase; Sensor Histidine Kinase/GAF Domain-Containing Protein; Histidine Kinase Of HWE Family; GGDEF Domain-Containing PAS Signal Transduction Protein; GAF/PAS-Family Sensor Histidine Kinase; Two-Component System Sensor Kinase; GAF And Chase3 Sensor Phosphotransfer Protein; FOG GGDEF Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Serine/Threonine Protein Kinase; Diguanylate-Cyclase; Signaling Protein; Gaf Sensor Signal Transduction Histidine Kinase; GGDEF And GAF Signalling Protein; Phosphodiesterase; GGDEF Family Protein; Magnesium Or Manganese-Dependent Protein Phosphatase; Sensor Kinase Protein

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQNLVSKKEDEERRLKSLAEYRILGTKPESCYDDITKIAAATCNVPISLMTLVDKDRQWFKSKVGLQISETRRDWSFCTH
AIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLE
LRKKSLNLLDALSNLHKQEGILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
DGQKRYLES

Sequences:

>Translated_249_residues
MQNLVSKKEDEERRLKSLAEYRILGTKPESCYDDITKIAAATCNVPISLMTLVDKDRQWFKSKVGLQISETRRDWSFCTH
AIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLE
LRKKSLNLLDALSNLHKQEGILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
DGQKRYLES
>Mature_249_residues
MQNLVSKKEDEERRLKSLAEYRILGTKPESCYDDITKIAAATCNVPISLMTLVDKDRQWFKSKVGLQISETRRDWSFCTH
AIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLE
LRKKSLNLLDALSNLHKQEGILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
DGQKRYLES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28902; Mature: 28902

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLVSKKEDEERRLKSLAEYRILGTKPESCYDDITKIAAATCNVPISLMTLVDKDRQWF
CCCCHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KSKVGLQISETRRDWSFCTHAIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLK
HHHHCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCEEEEECCCEE
TSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLELRKKSLNLLDALSNLHKQEG
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCCHHHHH
DGQKRYLES
HHHHHHCCC
>Mature Secondary Structure
MQNLVSKKEDEERRLKSLAEYRILGTKPESCYDDITKIAAATCNVPISLMTLVDKDRQWF
CCCCHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KSKVGLQISETRRDWSFCTHAIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLK
HHHHCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCEEEEECCCEE
TSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLELRKKSLNLLDALSNLHKQEG
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCCHHHHH
DGQKRYLES
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA