| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779706
Identifier: 78779706
GI number: 78779706
Start: 1235653
End: 1236765
Strand: Direct
Name: 78779706
Synonym: PMT9312_1323
Alternate gene names: NA
Gene position: 1235653-1236765 (Clockwise)
Preceding gene: 78779705
Following gene: 78779707
Centisome position: 72.29
GC content: 26.06
Gene sequence:
>1113_bases TTGAGTAGAAGAATACTACATATTATTTATAGCTTAGAAAAAGCTGGCGCAGAAGAGACGCTAGCTAAATTAGTTATTAA TGACCATATAAATAATCATAGAATTTTAACCTTAACAGGTGGAGATTATTATTTAACAAATCAAATTGAAAAGGAAAGTA TAAAAGTTTATAGTTTAAATATAAAAAAAAATTTACTCCTATTCCCTCTTTATTTAATAAGATCATTAAAAATTATCAGA GAAGAAAAAGTTTCAATTATACATTCATGGATGTATGTTTCTGATGTTTTTTCTTCATTATTAGGTTTCATAGCAAATAA AGAAGTAATTTGGTGTGTACGAAATACTACTTTGAGAATAGGTGGCAGCTCTTTATATTCAATTTTCTCAAGATTTATTC AAATACCTTTATCCTATATATCTCCTAATAAAATTATTTACTGCTCTTTATCTGCAAAATCACTTCATGAAAAAATGGGA TTTAATAAAAGATTAAGTGTTCATATCCCAAATGGAATTAACACTGAATTATTTAAACCTATTAATAAAAGAATCCTAAA TTATGGCAATTTAAGAATAGGTATGCCAGCAAGATTTGATGAGCAAAAAAATCATATCTTACTTTTAGAAACGATACATG AACTTATTAAAAACAAAATAAATCCAACTAATATAAAATTCATTCTTGCTGGGAGGGATGTTAATTATAATAACCTTAAA AATATATACAAAAAAGACTTAGATATCTTATTACCTTATATTGGCATTATGGGAGAAGTTAAAGACATGAATAAATTCTA TAATTCAATAGATTTCTGCATAGTATGTTCTTCCTATGGAGAAGCTTTTCCAAATGTAATAGCAGAGGCAATGGCTACTG GAGCTCCATGTATATCTACTGATGTAGGAGATGCCAAATTAATTATTGGTGACACAGGTTTTATTGTAAATGGTTATGAG CCGATTAATTTATTTCAAACTCTCCTTTATATTTTAGGAATTACTTCTAATTTATTTAGTATTAAATCAAAAATGGCTAG AGTTAGAATTAAAAATAACTTTTCACAAGAAAATATGATTAAAAAATACCAAGAGCTTTATTCCAAAATTTAA
Upstream 100 bases:
>100_bases CGAAAAAGAATATAATAAAAAAATTTTAAATAAGACTTAATATGATTTTCTTTGAAATTAAACTATTTACTATAATGAAT TAATTCTATAAATCAATAAA
Downstream 100 bases:
>100_bases ATCATGTGTGGTATAACAGGAATTATCTCATTTCAAAGTAGTATAGATCCTCAAAATATTCACAATATGAATGAGACTCT CATGCATAGAGGGCCTGATC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Protein; Group 1 Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase Protein; Glycosyltransferase WbdM; Phosphatidylinositol Alpha-Mannosyltransferase; O-Antigen Biosynthesis Glycosyltransferase; Lipopolysaccharide Core Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 1 Family; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSRRILHIIYSLEKAGAEETLAKLVINDHINNHRILTLTGGDYYLTNQIEKESIKVYSLNIKKNLLLFPLYLIRSLKIIR EEKVSIIHSWMYVSDVFSSLLGFIANKEVIWCVRNTTLRIGGSSLYSIFSRFIQIPLSYISPNKIIYCSLSAKSLHEKMG FNKRLSVHIPNGINTELFKPINKRILNYGNLRIGMPARFDEQKNHILLLETIHELIKNKINPTNIKFILAGRDVNYNNLK NIYKKDLDILLPYIGIMGEVKDMNKFYNSIDFCIVCSSYGEAFPNVIAEAMATGAPCISTDVGDAKLIIGDTGFIVNGYE PINLFQTLLYILGITSNLFSIKSKMARVRIKNNFSQENMIKKYQELYSKI
Sequences:
>Translated_370_residues MSRRILHIIYSLEKAGAEETLAKLVINDHINNHRILTLTGGDYYLTNQIEKESIKVYSLNIKKNLLLFPLYLIRSLKIIR EEKVSIIHSWMYVSDVFSSLLGFIANKEVIWCVRNTTLRIGGSSLYSIFSRFIQIPLSYISPNKIIYCSLSAKSLHEKMG FNKRLSVHIPNGINTELFKPINKRILNYGNLRIGMPARFDEQKNHILLLETIHELIKNKINPTNIKFILAGRDVNYNNLK NIYKKDLDILLPYIGIMGEVKDMNKFYNSIDFCIVCSSYGEAFPNVIAEAMATGAPCISTDVGDAKLIIGDTGFIVNGYE PINLFQTLLYILGITSNLFSIKSKMARVRIKNNFSQENMIKKYQELYSKI >Mature_369_residues SRRILHIIYSLEKAGAEETLAKLVINDHINNHRILTLTGGDYYLTNQIEKESIKVYSLNIKKNLLLFPLYLIRSLKIIRE EKVSIIHSWMYVSDVFSSLLGFIANKEVIWCVRNTTLRIGGSSLYSIFSRFIQIPLSYISPNKIIYCSLSAKSLHEKMGF NKRLSVHIPNGINTELFKPINKRILNYGNLRIGMPARFDEQKNHILLLETIHELIKNKINPTNIKFILAGRDVNYNNLKN IYKKDLDILLPYIGIMGEVKDMNKFYNSIDFCIVCSSYGEAFPNVIAEAMATGAPCISTDVGDAKLIIGDTGFIVNGYEP INLFQTLLYILGITSNLFSIKSKMARVRIKNNFSQENMIKKYQELYSKI
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42366; Mature: 42235
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRILHIIYSLEKAGAEETLAKLVINDHINNHRILTLTGGDYYLTNQIEKESIKVYSLN CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCEEEEEEE IKKNLLLFPLYLIRSLKIIREEKVSIIHSWMYVSDVFSSLLGFIANKEVIWCVRNTTLRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEE GGSSLYSIFSRFIQIPLSYISPNKIIYCSLSAKSLHEKMGFNKRLSVHIPNGINTELFKP CCHHHHHHHHHHHHCCHHHCCCCEEEEEECCHHHHHHHCCCCCEEEEECCCCCCHHHHHH INKRILNYGNLRIGMPARFDEQKNHILLLETIHELIKNKINPTNIKFILAGRDVNYNNLK HHHHHHCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH NIYKKDLDILLPYIGIMGEVKDMNKFYNSIDFCIVCSSYGEAFPNVIAEAMATGAPCIST HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEC DVGDAKLIIGDTGFIVNGYEPINLFQTLLYILGITSNLFSIKSKMARVRIKNNFSQENMI CCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KKYQELYSKI HHHHHHHHCC >Mature Secondary Structure SRRILHIIYSLEKAGAEETLAKLVINDHINNHRILTLTGGDYYLTNQIEKESIKVYSLN CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCEEEEEEE IKKNLLLFPLYLIRSLKIIREEKVSIIHSWMYVSDVFSSLLGFIANKEVIWCVRNTTLRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEE GGSSLYSIFSRFIQIPLSYISPNKIIYCSLSAKSLHEKMGFNKRLSVHIPNGINTELFKP CCHHHHHHHHHHHHCCHHHCCCCEEEEEECCHHHHHHHCCCCCEEEEECCCCCCHHHHHH INKRILNYGNLRIGMPARFDEQKNHILLLETIHELIKNKINPTNIKFILAGRDVNYNNLK HHHHHHCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH NIYKKDLDILLPYIGIMGEVKDMNKFYNSIDFCIVCSSYGEAFPNVIAEAMATGAPCIST HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEC DVGDAKLIIGDTGFIVNGYEPINLFQTLLYILGITSNLFSIKSKMARVRIKNNFSQENMI CCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KKYQELYSKI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA