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The map label for this gene is 78779476

Identifier: 78779476

GI number: 78779476

Start: 1004668

End: 1005162

Strand: Reverse

Name: 78779476

Synonym: PMT9312_1093

Alternate gene names: NA

Gene position: 1005162-1004668 (Counterclockwise)

Preceding gene: 78779477

Following gene: 78779474

Centisome position: 58.81

GC content: 21.62

Gene sequence:

>495_bases
ATGTATATTTTGAAAAACTTTTTTTTATTTAATAAAAAATCTGAAAATAATAAAGACTTTAGTAATGGGGTAGTTGATCA
GTATATAGAAATTGCTAAGTTAGTAAAACAGGCAAGAATCGAACAAAACCTAACAATAAAAGAACTCTCACAAATATCAA
AAATTCCTGAACAAACAATAATTTCAATTGAAAATAATAATATAAATATTAGACCTAAGTATCCCTTTATAAGATCCATA
TTAATTAAATTGGAGGAATGCTTAGTATTAAAAAAAAATACATTAGTAAAATTAGTAATTAGAGAAAAAGAAACTTTTAA
GAATGAAAAAAAGGATTTTCTTGTCAGCAAATTCGACCTTATAAATACATGGCAGGGAACTCTTTTGTATTTTTTTATTT
TAGTACTAACTATATTTATATTAAAGAGATACTTTATTTTGAATGTAAATGTTATTGAGATTCAAAATATTGAAAATAAA
ATGATTGATAAATAA

Upstream 100 bases:

>100_bases
AAATTTACTTATTATTTTTAATTGATTAAGATTAAATTAATTTAATTATTTTTCTCATAAGATTAAGTAGTTAAAGAATT
AATAAATTAGCTAATATGGA

Downstream 100 bases:

>100_bases
TCTTAAAAAAAATATCTATTTTCTTGTCCTGCCAAAATTATTTCCTAGCTCACTAAATCTTCTAATATTGTTTTCTATTT
CTCCTAAAGGGCGATTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MYILKNFFLFNKKSENNKDFSNGVVDQYIEIAKLVKQARIEQNLTIKELSQISKIPEQTIISIENNNINIRPKYPFIRSI
LIKLEECLVLKKNTLVKLVIREKETFKNEKKDFLVSKFDLINTWQGTLLYFFILVLTIFILKRYFILNVNVIEIQNIENK
MIDK

Sequences:

>Translated_164_residues
MYILKNFFLFNKKSENNKDFSNGVVDQYIEIAKLVKQARIEQNLTIKELSQISKIPEQTIISIENNNINIRPKYPFIRSI
LIKLEECLVLKKNTLVKLVIREKETFKNEKKDFLVSKFDLINTWQGTLLYFFILVLTIFILKRYFILNVNVIEIQNIENK
MIDK
>Mature_164_residues
MYILKNFFLFNKKSENNKDFSNGVVDQYIEIAKLVKQARIEQNLTIKELSQISKIPEQTIISIENNNINIRPKYPFIRSI
LIKLEECLVLKKNTLVKLVIREKETFKNEKKDFLVSKFDLINTWQGTLLYFFILVLTIFILKRYFILNVNVIEIQNIENK
MIDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19551; Mature: 19551

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYILKNFFLFNKKSENNKDFSNGVVDQYIEIAKLVKQARIEQNLTIKELSQISKIPEQTI
CCEEHHEHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHE
ISIENNNINIRPKYPFIRSILIKLEECLVLKKNTLVKLVIREKETFKNEKKDFLVSKFDL
EEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHHHHHHHHHHHHHHH
INTWQGTLLYFFILVLTIFILKRYFILNVNVIEIQNIENKMIDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCCC
>Mature Secondary Structure
MYILKNFFLFNKKSENNKDFSNGVVDQYIEIAKLVKQARIEQNLTIKELSQISKIPEQTI
CCEEHHEHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHE
ISIENNNINIRPKYPFIRSILIKLEECLVLKKNTLVKLVIREKETFKNEKKDFLVSKFDL
EEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHHHHHHHHHHHHHHH
INTWQGTLLYFFILVLTIFILKRYFILNVNVIEIQNIENKMIDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA