| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779419
Identifier: 78779419
GI number: 78779419
Start: 950479
End: 950886
Strand: Direct
Name: 78779419
Synonym: PMT9312_1036
Alternate gene names: NA
Gene position: 950479-950886 (Clockwise)
Preceding gene: 78779418
Following gene: 78779422
Centisome position: 55.61
GC content: 28.92
Gene sequence:
>408_bases ATGACTAAAGTCAAATGTTCTTATTTGGGAGATTTAAACTGTGAGGCTATTCATCTACAATCAGGAAGTCTTATAAAAAC GGATGCGCCTTTAGATCACTTTGGCAAAGGTGAAAGTTTTTCACCAACTGATTTATTAGCAACATCTCTAGGTACTTGTC TGCTAACCATTATGGCAATTAAAGCTAAATCAAAAGGATTTGATTTGGAAGGTATATATTTAAATATTGAAAAACTTATG ACGCAAAATAACGAAAGAAAGATAAAAAAACTAATAATAGATATTTTTATACCAGAAAGCACTTCTAATGAAACTATTAA TTTCTTGAAAATAGCTTCCCAAGATTGTCCAGTTACAAGAAATTTATCTCAAGAAATAGATATTAAAATTAGTTGGCATC ATAAATAA
Upstream 100 bases:
>100_bases ACTAAAATAAATCTAATACTTTTGTTTTTGATAAATTAACTTGGTTTTTTCCATAAATTTTGTTATTAATAAAATTTTCC TAATTTAATGTTTCTTTAAA
Downstream 100 bases:
>100_bases ATCACAAAAATAATAATTAAAGAAACTAATGAAATACATTATTGGAATAATCATTCTGCTTTTTGGAATATATATTATTA CTGATTTAGCATTAAAGACT
Product: putative stress-induced protein OsmC
Products: NA
Alternate protein names: Redox Protein; Stress-Induced Protein OsmC; OsmC/Ohr Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Osmc Family Protein; OsmC-Like Protein; Osmc-Like Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTKVKCSYLGDLNCEAIHLQSGSLIKTDAPLDHFGKGESFSPTDLLATSLGTCLLTIMAIKAKSKGFDLEGIYLNIEKLM TQNNERKIKKLIIDIFIPESTSNETINFLKIASQDCPVTRNLSQEIDIKISWHHK
Sequences:
>Translated_135_residues MTKVKCSYLGDLNCEAIHLQSGSLIKTDAPLDHFGKGESFSPTDLLATSLGTCLLTIMAIKAKSKGFDLEGIYLNIEKLM TQNNERKIKKLIIDIFIPESTSNETINFLKIASQDCPVTRNLSQEIDIKISWHHK >Mature_134_residues TKVKCSYLGDLNCEAIHLQSGSLIKTDAPLDHFGKGESFSPTDLLATSLGTCLLTIMAIKAKSKGFDLEGIYLNIEKLMT QNNERKIKKLIIDIFIPESTSNETINFLKIASQDCPVTRNLSQEIDIKISWHHK
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15083; Mature: 14951
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVKCSYLGDLNCEAIHLQSGSLIKTDAPLDHFGKGESFSPTDLLATSLGTCLLTIMAI CCEEEEEECCCCCCEEEEECCCCEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KAKSKGFDLEGIYLNIEKLMTQNNERKIKKLIIDIFIPESTSNETINFLKIASQDCPVTR HCCCCCCCCEEEEEEHHHHHCCCCHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCC NLSQEIDIKISWHHK CCCCEEEEEEEEECC >Mature Secondary Structure TKVKCSYLGDLNCEAIHLQSGSLIKTDAPLDHFGKGESFSPTDLLATSLGTCLLTIMAI CEEEEEECCCCCCEEEEECCCCEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KAKSKGFDLEGIYLNIEKLMTQNNERKIKKLIIDIFIPESTSNETINFLKIASQDCPVTR HCCCCCCCCEEEEEEHHHHHCCCCHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCC NLSQEIDIKISWHHK CCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA