| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779422
Identifier: 78779422
GI number: 78779422
Start: 952775
End: 953023
Strand: Direct
Name: 78779422
Synonym: PMT9312_1039
Alternate gene names: NA
Gene position: 952775-953023 (Clockwise)
Preceding gene: 78779419
Following gene: 78779424
Centisome position: 55.74
GC content: 36.95
Gene sequence:
>249_bases ATGAATTTTATTTTTTCTTTTTTATTAGCATCTGTGATGTGGGTACAAGTTCCACAGTGGGAAGCTGACTGGTCAAAATG TGCTGTAGATGTCCCCGATTCATCATGTCACTGGTACGTAGCTGCTCCCGATAATACGTTTGGGGAAGGATTTAATTGGG AAAACGCTCCTTGGTTTGATGCTAATGGATTACAGGATGTAGCTAAAATTGAAAAAGAATCTGTAGTAGAAAAACTTCAA AATAATTAA
Upstream 100 bases:
>100_bases ATTCAAAAATATGCATAAATATCAAATACTTGAGAATTACTGGAAGAAAAGAAAGAAAGAATGTGAAAAAAATCTTTCAA AATTTTGCTAACCAATAATT
Downstream 100 bases:
>100_bases AGTTTCTATTTCATCAATTAACTTTTAAAAGTATTTAAATCTATTTGCTTAGTGGTTAACTTTTGATTAATTAAAAAATT TTTATGCGTTTCAAAGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MNFIFSFLLASVMWVQVPQWEADWSKCAVDVPDSSCHWYVAAPDNTFGEGFNWENAPWFDANGLQDVAKIEKESVVEKLQ NN
Sequences:
>Translated_82_residues MNFIFSFLLASVMWVQVPQWEADWSKCAVDVPDSSCHWYVAAPDNTFGEGFNWENAPWFDANGLQDVAKIEKESVVEKLQ NN >Mature_82_residues MNFIFSFLLASVMWVQVPQWEADWSKCAVDVPDSSCHWYVAAPDNTFGEGFNWENAPWFDANGLQDVAKIEKESVVEKLQ NN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9399; Mature: 9399
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIFSFLLASVMWVQVPQWEADWSKCAVDVPDSSCHWYVAAPDNTFGEGFNWENAPWFD CHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCC ANGLQDVAKIEKESVVEKLQNN CCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFIFSFLLASVMWVQVPQWEADWSKCAVDVPDSSCHWYVAAPDNTFGEGFNWENAPWFD CHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCC ANGLQDVAKIEKESVVEKLQNN CCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA