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The map label for this gene is 78779366

Identifier: 78779366

GI number: 78779366

Start: 916436

End: 917230

Strand: Direct

Name: 78779366

Synonym: PMT9312_0982

Alternate gene names: NA

Gene position: 916436-917230 (Clockwise)

Preceding gene: 78779365

Following gene: 78779367

Centisome position: 53.62

GC content: 30.82

Gene sequence:

>795_bases
ATGATATCTAATTTGATTAACCGCAAAATATTCACCTTATTAAAGGTGCAATATTCTAACATGTTGGAATATAGGGTAGA
AATTGCATTATGGGCAATTTCAGGAATTATTCCTTTTTTCATGTTAAACATTTGGACAAACAATAATCTAAATGAATCGA
TAAACATTAGCGATGTTATGCTTTCTAGGTATTTCTTATGTGCTTTTTTTGTAAGACAGTTTTCTGTAGTTTGGGTTGTA
TTTAGCTTTGAAGAGGATTCTCTTATGGGGAAGGTATCTCCGTATTTAATTCAACCTTTAAATCCATTTTTCAGATATTT
TGCACAACATCTTGCAGAACAAATAACAAGATTTCCTTTCGCACTAATAATCGCATTTTTCTTTTTTATATTCAATCCAG
AAAGTATATGGATTCCAAATTTGGGTATTTTATTCTTATCGATAATATCGACTTTCTTATCTTTCTTAATTCAATTTTTA
ATTCAGTCAATAGTTGCATGTCTATGCTTCTGGACAGAGAAAGCATCATCGATAGAAAGATTGTTATTTATTCCAACTTT
ATTTCTCTCAGGTCTTTTAGCTCCAGTAGTTTCATTTCCCGAATATGTTAAATCTTGGATTTATTTAACTCCTTTTCCAT
ATCTAATTGATTTCCCTGCGAACTTACTATCAGGTAATGAAACAAACATTAGTGGAGGCTTAACTATGCAAATTGCATGG
ATTCTTTTACTTTTCCCAATATTCAAAAAGATCTGGTCTGAAGGAACGAAAAAATATACTGCTATGGGCTCATGA

Upstream 100 bases:

>100_bases
TCTCTAAAAACAATTCTAAATGATTTTGATATTGAAGACCTTTTTATAAATGAACCACCTATAGATGAAATTATTGGGAG
GGTATTAATTAAAAAAGATT

Downstream 100 bases:

>100_bases
ATCTAAGAAAATATCTAAAAGTTTATAAAAAATTCTTACATACTTCTTTGGCTTCTGAGTTGGAGTATAAGACAAATATA
TTAATTGATTTAATTACTGC

Product: putative multidrug efflux ABC transporter

Products: NA

Alternate protein names: ABC Transporter Permease; Abc Transporter Integral Membrane Protein; ABC Transporter Inner Membrane Subunit; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein; ABC-2 Type Transport System Permease Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MISNLINRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV
FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESIWIPNLGILFLSIISTFLSFLIQFL
IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPEYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLTMQIAW
ILLLFPIFKKIWSEGTKKYTAMGS

Sequences:

>Translated_264_residues
MISNLINRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV
FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESIWIPNLGILFLSIISTFLSFLIQFL
IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPEYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLTMQIAW
ILLLFPIFKKIWSEGTKKYTAMGS
>Mature_264_residues
MISNLINRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV
FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESIWIPNLGILFLSIISTFLSFLIQFL
IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPEYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLTMQIAW
ILLLFPIFKKIWSEGTKKYTAMGS

Specific function: Unknown

COG id: COG4587

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30652; Mature: 30652

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNLINRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LSRYFLCAFFVRQFSVVWVVFSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPF
HHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCHH
ALIIAFFFFIFNPESIWIPNLGILFLSIISTFLSFLIQFLIQSIVACLCFWTEKASSIER
HHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFIPTLFLSGLLAPVVSFPEYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLTMQIAW
HHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHH
ILLLFPIFKKIWSEGTKKYTAMGS
HHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MISNLINRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LSRYFLCAFFVRQFSVVWVVFSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPF
HHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCHH
ALIIAFFFFIFNPESIWIPNLGILFLSIISTFLSFLIQFLIQSIVACLCFWTEKASSIER
HHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFIPTLFLSGLLAPVVSFPEYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLTMQIAW
HHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHH
ILLLFPIFKKIWSEGTKKYTAMGS
HHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA