Click here to switch to the map view.

The map label for this gene is 78779367

Identifier: 78779367

GI number: 78779367

Start: 917227

End: 918021

Strand: Direct

Name: 78779367

Synonym: PMT9312_0983

Alternate gene names: NA

Gene position: 917227-918021 (Clockwise)

Preceding gene: 78779366

Following gene: 78779371

Centisome position: 53.66

GC content: 26.54

Gene sequence:

>795_bases
ATGAATCTAAGAAAATATCTAAAAGTTTATAAAAAATTCTTACATACTTCTTTGGCTTCTGAGTTGGAGTATAAGACAAA
TATATTAATTGATTTAATTACTGCAATTTTAAGTTTAATAGGGAGTATTTTTCTATTATCTATTTTCTTTCAAAGTAATG
GATATATTGGAGGGTGGAAATTTGAACAGGCACTAATAATTCAAGGTATTTATACAATTTTGAATGGAATAACTAATACA
TGGTTCAATCCAAATCTTACAGAAATAGTTAAGCATATTAGAGAAGGAACCTTAGATTTCGTACTTTTAAAGCCTATTGA
TAGTCAATTTTTCATTTCCCTAAAAAGAATTAGTCCATCTGGTTTTTTAGAAATAATGCTTGGATTTTGCTTATTGTTAT
ACTGCATCAAAATTAATCAAATAAATTTAAATTTAACCTTTCTTTCTCTATGTTTAATTACGATAATCTGCTCAATTTGT
ATCTTATATAGCTTATGGTTTTTTATTTCAACAACTACTATTTGGTTTGTTAAAACATGGAATGCCACAGAAGTATTAAG
ATCGTTCCTTTATATTGGAAGATTTCCTTTAAATTCATTTTCATTTTCATTAAGAATATTTTTTAGTGTTTTCATTCCTA
TTGCATTTATAACTACAATTCCCTCCGAAGTTTTCTTAGGTATTTCTCAATTATGGAAAATATTGCTTGAAGTTATTGTT
GCTTTAATATTTTGCTCTACTTCAAGAAAGTTCTGGTTATATGCATTAAAGTTCTACTCTTCGGCATCGAGCTAA

Upstream 100 bases:

>100_bases
GTGGAGGCTTAACTATGCAAATTGCATGGATTCTTTTACTTTTCCCAATATTCAAAAAGATCTGGTCTGAAGGAACGAAA
AAATATACTGCTATGGGCTC

Downstream 100 bases:

>100_bases
ATAAATATTATTTAACAACCTCCCTGCAAAATTCCCAAATTCTTTGTTTACTTTTCAGATTAGATAGTCGAGATAATTTC
TTAAAAGTATTTGTTGATTT

Product: membrane protein, multidrug efflux associated

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNLRKYLKVYKKFLHTSLASELEYKTNILIDLITAILSLIGSIFLLSIFFQSNGYIGGWKFEQALIIQGIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKRISPSGFLEIMLGFCLLLYCIKINQINLNLTFLSLCLITIICSIC
ILYSLWFFISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGISQLWKILLEVIV
ALIFCSTSRKFWLYALKFYSSASS

Sequences:

>Translated_264_residues
MNLRKYLKVYKKFLHTSLASELEYKTNILIDLITAILSLIGSIFLLSIFFQSNGYIGGWKFEQALIIQGIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKRISPSGFLEIMLGFCLLLYCIKINQINLNLTFLSLCLITIICSIC
ILYSLWFFISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGISQLWKILLEVIV
ALIFCSTSRKFWLYALKFYSSASS
>Mature_264_residues
MNLRKYLKVYKKFLHTSLASELEYKTNILIDLITAILSLIGSIFLLSIFFQSNGYIGGWKFEQALIIQGIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKRISPSGFLEIMLGFCLLLYCIKINQINLNLTFLSLCLITIICSIC
ILYSLWFFISTTTIWFVKTWNATEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGISQLWKILLEVIV
ALIFCSTSRKFWLYALKFYSSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30511; Mature: 30511

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRKYLKVYKKFLHTSLASELEYKTNILIDLITAILSLIGSIFLLSIFFQSNGYIGGWK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
FEQALIIQGIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKRISPS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHEEEECCCCC
GFLEIMLGFCLLLYCIKINQINLNLTFLSLCLITIICSICILYSLWFFISTTTIWFVKTW
HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
NATEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGISQLWKILLEVIV
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIFCSTSRKFWLYALKFYSSASS
HHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLRKYLKVYKKFLHTSLASELEYKTNILIDLITAILSLIGSIFLLSIFFQSNGYIGGWK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
FEQALIIQGIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKRISPS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHEEEECCCCC
GFLEIMLGFCLLLYCIKINQINLNLTFLSLCLITIICSICILYSLWFFISTTTIWFVKTW
HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
NATEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGISQLWKILLEVIV
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIFCSTSRKFWLYALKFYSSASS
HHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA