Click here to switch to the map view.

The map label for this gene is acsF [H]

Identifier: 78779340

GI number: 78779340

Start: 886519

End: 887691

Strand: Direct

Name: acsF [H]

Synonym: PMT9312_0956

Alternate gene names: 78779340

Gene position: 886519-887691 (Clockwise)

Preceding gene: 78779339

Following gene: 78779341

Centisome position: 51.87

GC content: 32.4

Gene sequence:

>1173_bases
ATGTCTCAATCTATTATTGAATCTAAAAATAAAAAAGATGTAAATAACGGGAAGATACCAGCTAAAGAAACAATTTTGTC
TCCAAGGTTCTACACAACAGACTTTGAGGCAATGGAAAATATGGACTTATCGATAAATGAGGAGGAATTGGAAGCCATAT
GTGAGGAATTTAGAAAAGACTACAATAGGCATCATTTTGTTAGAAATAGTGAATTTGACGGAGCTGCAGAGAAATTAGAT
CCTGAGACAAGAGAACTTTTCGTTGATTTTCTTGAGGGAAGTTGTACTTCAGAATTTTCGGGTTTTTTACTTTATAAGGA
GCTAAGCAGAAGAATTAAAGATAAAAACCCTCTTCTTGCAGAATGCTTTGCTCATATGGCCAGAGATGAAGCTAGACATG
CAGGTTTCTTGAATAAATCAATGAGTGACTTTGGATTACAGTTAGATTTAGGTTTTTTAACAGCAAATAAAGATTACACT
TATTTTCCACCTAGAAGTATTTTTTACGCCACTTATCTATCTGAAAAAATAGGTTATTGGAGATATATTGCAATTTACAG
GCATCTTGAAAAGAATCCAGATAGCAAGATTTTTCCACTATTTAACTACTTTGAAAATTGGTGTCAAGATGAAAATAGGC
ATGGAGATTTCTTCGACGCACTTATGAAAGCACAACCACGTACTGTCAAATCATTAAGTCAGAAAATCAACATTGGGGGG
ACTACCTTTACACATCCATTATTTGATTATTTCCATAGATTTAGATACTTTTTGAACAATCTTCCAATAACATCAAAATT
ATGGTCAAGGTTTTTTCTTTTGGCAGTATTTGCGACTATGTATGCTAGGGATCTTGGAATCAAAAAAGATTTCTACAGTT
CATTAGGGTTAGACGCCAGGGAGTACGACCAGTATGTTATCAATAAAACAAATGAAACTTCTGCTAGAGTTTTCCCAGTA
GTTCTAGATGTATATGATAAATCTTTTTATGGAAGATTAGATAAAATAGTTGAAAATAATAAGGTCCTTTCTAATATTGC
TAACAGCGAAGAAAATAAAGTATCTAAAACTTTAAAGAAATTACCTACCTATTTATCAAACGGTTACCAACTATTAAGAC
TATACTTATTAAAACCTCTAGATAGCAAAGATTTCCAACCTTCGATTAGATAA

Upstream 100 bases:

>100_bases
AATTATTAGGAGTTAATTAAAAAAACAATAACACCTAGTTAACTTTTCACTCGAAAATACAAATCATAGTAAATAATAGT
ATTAATAAATCAAAGAAAAG

Downstream 100 bases:

>100_bases
TCTTTTATATAGAGCAAATTTATAAATTCATATGCTTTCTTCTCAAATTAAATCAAATGAAATCGAATTTGGTAGTTGCA
ATAAATATTTATTAGAAGAA

Product: magnesium-protoporphyrin IX monomethyl ester cyclase

Products: NA

Alternate protein names: Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSQSIIESKNKKDVNNGKIPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKDYNRHHFVRNSEFDGAAEKLD
PETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYT
YFPPRSIFYATYLSEKIGYWRYIAIYRHLEKNPDSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKINIGG
TTFTHPLFDYFHRFRYFLNNLPITSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAREYDQYVINKTNETSARVFPV
VLDVYDKSFYGRLDKIVENNKVLSNIANSEENKVSKTLKKLPTYLSNGYQLLRLYLLKPLDSKDFQPSIR

Sequences:

>Translated_390_residues
MSQSIIESKNKKDVNNGKIPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKDYNRHHFVRNSEFDGAAEKLD
PETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYT
YFPPRSIFYATYLSEKIGYWRYIAIYRHLEKNPDSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKINIGG
TTFTHPLFDYFHRFRYFLNNLPITSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAREYDQYVINKTNETSARVFPV
VLDVYDKSFYGRLDKIVENNKVLSNIANSEENKVSKTLKKLPTYLSNGYQLLRLYLLKPLDSKDFQPSIR
>Mature_389_residues
SQSIIESKNKKDVNNGKIPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKDYNRHHFVRNSEFDGAAEKLDP
ETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTY
FPPRSIFYATYLSEKIGYWRYIAIYRHLEKNPDSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKINIGGT
TFTHPLFDYFHRFRYFLNNLPITSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAREYDQYVINKTNETSARVFPVV
LDVYDKSFYGRLDKIVENNKVLSNIANSEENKVSKTLKKLPTYLSNGYQLLRLYLLKPLDSKDFQPSIR

Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomet

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AcsF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008434
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: =1.14.13.81 [H]

Molecular weight: Translated: 45810; Mature: 45679

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSIIESKNKKDVNNGKIPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKD
CCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
YNRHHFVRNSEFDGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLA
HHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH
ECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLSEKIGYW
HHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHH
RYIAIYRHLEKNPDSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKINIGG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC
TTFTHPLFDYFHRFRYFLNNLPITSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAR
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH
EYDQYVINKTNETSARVFPVVLDVYDKSFYGRLDKIVENNKVLSNIANSEENKVSKTLKK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LPTYLSNGYQLLRLYLLKPLDSKDFQPSIR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SQSIIESKNKKDVNNGKIPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKD
CCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
YNRHHFVRNSEFDGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLA
HHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH
ECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLSEKIGYW
HHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHH
RYIAIYRHLEKNPDSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKINIGG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC
TTFTHPLFDYFHRFRYFLNNLPITSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAR
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH
EYDQYVINKTNETSARVFPVVLDVYDKSFYGRLDKIVENNKVLSNIANSEENKVSKTLKK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LPTYLSNGYQLLRLYLLKPLDSKDFQPSIR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA