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The map label for this gene is 78779327

Identifier: 78779327

GI number: 78779327

Start: 876624

End: 876845

Strand: Direct

Name: 78779327

Synonym: PMT9312_0943

Alternate gene names: NA

Gene position: 876624-876845 (Clockwise)

Preceding gene: 78779326

Following gene: 78779328

Centisome position: 51.29

GC content: 27.03

Gene sequence:

>222_bases
ATGAGGGAATATATTGAGGCAAATCTTAAAGTAATTAGAAAATACTTAAAAAAACGAAAAAAGTCTACATCAAAATTAAA
TAATGAATCGATAATGGAAGAATTCAAAGAATGGAGCAAAGATCCATTACCGGAAACAGAATCAATATGGACTTTACCTG
ACTTAACAAGAAATGAAAGACTAAAAAATTTTTGTCGCTCAATTAAAAAGGAAATAAGATAA

Upstream 100 bases:

>100_bases
CTCATTTGGTCTTTTTCAAGCAGTTCAAAACGCCTAATCGAGATCTCCCATAAAGGAGCGCGAGCTAGATGATAGATTAA
TACAATATTTAGTATTTATT

Downstream 100 bases:

>100_bases
GTTTTTAACTACCTAGTTGTATATGATTTACCTTTAAGTAAAAATAACCCGCAAATCCTACTATATTTAATAATATAACG
AAAATCCAAGCTCCAATTGG

Product: RNA-dependent RNA polymerase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MREYIEANLKVIRKYLKKRKKSTSKLNNESIMEEFKEWSKDPLPETESIWTLPDLTRNERLKNFCRSIKKEIR

Sequences:

>Translated_73_residues
MREYIEANLKVIRKYLKKRKKSTSKLNNESIMEEFKEWSKDPLPETESIWTLPDLTRNERLKNFCRSIKKEIR
>Mature_73_residues
MREYIEANLKVIRKYLKKRKKSTSKLNNESIMEEFKEWSKDPLPETESIWTLPDLTRNERLKNFCRSIKKEIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8960; Mature: 8960

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYIEANLKVIRKYLKKRKKSTSKLNNESIMEEFKEWSKDPLPETESIWTLPDLTRNER
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
LKNFCRSIKKEIR
HHHHHHHHHHHCC
>Mature Secondary Structure
MREYIEANLKVIRKYLKKRKKSTSKLNNESIMEEFKEWSKDPLPETESIWTLPDLTRNER
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
LKNFCRSIKKEIR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA