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The map label for this gene is ahpC [C]

Identifier: 78779328

GI number: 78779328

Start: 877314

End: 877898

Strand: Direct

Name: ahpC [C]

Synonym: PMT9312_0944

Alternate gene names: 78779328

Gene position: 877314-877898 (Clockwise)

Preceding gene: 78779327

Following gene: 78779331

Centisome position: 51.33

GC content: 37.78

Gene sequence:

>585_bases
ATGAGCTTAAGAGTTGGACAAGAAGCACCAGATTTCACTGCTACAGCAGTATACGATCAAGAGTTTAAGGAAATTACACT
TTCAGGTCTAAGAGGTAAGTGGGTTGTTTTATTCTTTTACCCATTAGACTTTACATTTGTATGTCCAACTGAGATCACAG
CATTTAGTGATAGATATCAAGATTTCTCATCAATTGATGCGGAAATACTTGGTGTATCAGTTGATAGCAAACACTGTCAT
TTAGCTTGGATACAAACTCCGAGAAATGAGGGTGGAATAGGTGATATTAACTACCCATTAGTTTCTGATTTAAAAAGAGA
AATTTGCCAGGCATATAACGTTTTAAATGATGATGGTGAAGCAGATAGAGGTTTATTTCTCATCAATCCTGAAGGAATAG
TTATGCATACGACTGTTAACAAAGCTCCTGTAGGTAGAAATGTTGATGAAACATTAAGAATCCTTCAAGGCTATCAATAC
GTCGCTGCAAACCCCGATGAAGTATGTCCTGCAAACTGGACCCCCGGGGAGAAGACAATGTTAGAGGACCCTAAAGGTAG
TAAAGAATATTTTTCTGCGCTATAG

Upstream 100 bases:

>100_bases
TTGAATTTGAAAAAAACTTGCTAATTTATTGTCAATAAAATTATAATACTTATTAAGGTCTTATAGACCATACATAATTC
AAATAAGGACAAATTATTCA

Downstream 100 bases:

>100_bases
AAGGATTAGAAACTTTTAGGTAAGTATTGAGTAGTAAATAATTATAAAAAAATAAAAAATAACCATATTCAAAAGGGGGA
TAATATCCCCATTTTGAGGC

Product: thioredoxin peroxidase

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSLRVGQEAPDFTATAVYDQEFKEITLSGLRGKWVVLFFYPLDFTFVCPTEITAFSDRYQDFSSIDAEILGVSVDSKHCH
LAWIQTPRNEGGIGDINYPLVSDLKREICQAYNVLNDDGEADRGLFLINPEGIVMHTTVNKAPVGRNVDETLRILQGYQY
VAANPDEVCPANWTPGEKTMLEDPKGSKEYFSAL

Sequences:

>Translated_194_residues
MSLRVGQEAPDFTATAVYDQEFKEITLSGLRGKWVVLFFYPLDFTFVCPTEITAFSDRYQDFSSIDAEILGVSVDSKHCH
LAWIQTPRNEGGIGDINYPLVSDLKREICQAYNVLNDDGEADRGLFLINPEGIVMHTTVNKAPVGRNVDETLRILQGYQY
VAANPDEVCPANWTPGEKTMLEDPKGSKEYFSAL
>Mature_193_residues
SLRVGQEAPDFTATAVYDQEFKEITLSGLRGKWVVLFFYPLDFTFVCPTEITAFSDRYQDFSSIDAEILGVSVDSKHCHL
AWIQTPRNEGGIGDINYPLVSDLKREICQAYNVLNDDGEADRGLFLINPEGIVMHTTVNKAPVGRNVDETLRILQGYQYV
AANPDEVCPANWTPGEKTMLEDPKGSKEYFSAL

Specific function: Reduces peroxides. May play an important role in eliminating peroxides generated during metabolism [H]

COG id: COG0450

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=190, Percent_Identity=57.3684210526316, Blast_Score=226, Evalue=1e-59,
Organism=Homo sapiens, GI4505591, Length=191, Percent_Identity=56.020942408377, Blast_Score=223, Evalue=7e-59,
Organism=Homo sapiens, GI32455266, Length=191, Percent_Identity=56.020942408377, Blast_Score=223, Evalue=7e-59,
Organism=Homo sapiens, GI32455264, Length=191, Percent_Identity=56.020942408377, Blast_Score=223, Evalue=7e-59,
Organism=Homo sapiens, GI5802974, Length=188, Percent_Identity=54.2553191489362, Blast_Score=218, Evalue=3e-57,
Organism=Homo sapiens, GI5453549, Length=192, Percent_Identity=53.125, Blast_Score=215, Evalue=2e-56,
Organism=Homo sapiens, GI32483377, Length=186, Percent_Identity=53.763440860215, Blast_Score=214, Evalue=3e-56,
Organism=Homo sapiens, GI33188454, Length=88, Percent_Identity=64.7727272727273, Blast_Score=120, Evalue=6e-28,
Organism=Homo sapiens, GI4758638, Length=190, Percent_Identity=27.8947368421053, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1786822, Length=181, Percent_Identity=37.0165745856354, Blast_Score=135, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI193204376, Length=189, Percent_Identity=51.8518518518518, Blast_Score=205, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI32565831, Length=188, Percent_Identity=52.1276595744681, Blast_Score=205, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17554494, Length=186, Percent_Identity=50, Blast_Score=196, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI25153706, Length=200, Percent_Identity=26.5, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323613, Length=194, Percent_Identity=47.9381443298969, Blast_Score=187, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6320661, Length=193, Percent_Identity=47.6683937823834, Blast_Score=182, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6319407, Length=189, Percent_Identity=28.042328042328, Blast_Score=93, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24656348, Length=189, Percent_Identity=51.8518518518518, Blast_Score=207, Evalue=3e-54,
Organism=Drosophila melanogaster, GI17864676, Length=189, Percent_Identity=51.8518518518518, Blast_Score=207, Evalue=3e-54,
Organism=Drosophila melanogaster, GI17738015, Length=194, Percent_Identity=51.5463917525773, Blast_Score=206, Evalue=5e-54,
Organism=Drosophila melanogaster, GI17157991, Length=189, Percent_Identity=51.3227513227513, Blast_Score=202, Evalue=9e-53,
Organism=Drosophila melanogaster, GI24641739, Length=189, Percent_Identity=51.3227513227513, Blast_Score=202, Evalue=9e-53,
Organism=Drosophila melanogaster, GI21357347, Length=191, Percent_Identity=46.5968586387435, Blast_Score=188, Evalue=2e-48,
Organism=Drosophila melanogaster, GI17975518, Length=189, Percent_Identity=32.2751322751323, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24652436, Length=189, Percent_Identity=32.2751322751323, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24652434, Length=189, Percent_Identity=32.2751322751323, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24581278, Length=187, Percent_Identity=27.807486631016, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2250 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 6040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Stationary-Phase

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR019479
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF10417 1-cysPrx_C; PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 21722; Mature: 21590

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRVGQEAPDFTATAVYDQEFKEITLSGLRGKWVVLFFYPLDFTFVCPTEITAFSDRYQ
CCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHH
DFSSIDAEILGVSVDSKHCHLAWIQTPRNEGGIGDINYPLVSDLKREICQAYNVLNDDGE
HHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
ADRGLFLINPEGIVMHTTVNKAPVGRNVDETLRILQGYQYVAANPDEVCPANWTPGEKTM
CCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCC
LEDPKGSKEYFSAL
CCCCCCCHHHHHCC
>Mature Secondary Structure 
SLRVGQEAPDFTATAVYDQEFKEITLSGLRGKWVVLFFYPLDFTFVCPTEITAFSDRYQ
CCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHH
DFSSIDAEILGVSVDSKHCHLAWIQTPRNEGGIGDINYPLVSDLKREICQAYNVLNDDGE
HHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
ADRGLFLINPEGIVMHTTVNKAPVGRNVDETLRILQGYQYVAANPDEVCPANWTPGEKTM
CCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCC
LEDPKGSKEYFSAL
CCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]