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The map label for this gene is 78779319

Identifier: 78779319

GI number: 78779319

Start: 871314

End: 871895

Strand: Direct

Name: 78779319

Synonym: PMT9312_0935

Alternate gene names: NA

Gene position: 871314-871895 (Clockwise)

Preceding gene: 78779318

Following gene: 78779321

Centisome position: 50.98

GC content: 22.68

Gene sequence:

>582_bases
ATGCTTGGTTGCGTACCAAATATCATTGAAGAAAATAAAGTAATACAAAAAATAAATACTTTAGATATGAATATTTTCTC
TCAATCAGGAGAAAAAATATACTCAATTACCAGCCCAGACTCAAGTTATAATATTACTGAACTAAAATTTAAATTAAAAA
AACCCACCATAAATATTTTCAAAGGAGAAGAGACTAAATATATTATTAGTTCAGAAGAATCTACATTATCAGACAATAAT
AAACTTCTTAAATTGAAAGGGAATGTAAAATTAAAAACTCTTAAGAAAGATGAGGATATATTATATGCCGATACTTTTAT
TTGGAATATAGAAGAGACTAACTATTTATTAGAGGGAAATATAAGATTTGAAAATCAAAATATCATCTTAAATTCAGGAA
AAGCTATTTTAGGTTCTAATAACATAATTGAATTCTTCAATCCAGTAAAATATATAATAAAAGATGAAAATAACGATAAT
AAATATGAAATAAATTCAGAAAATGCTTACTATAATCTAAATACTGAATCTGTAAGTTTTAAAGCAAAAGATAAAAGAGT
TAAATCAATAATATATTTTTAA

Upstream 100 bases:

>100_bases
TTATTAGTTAGTAACTCAAGCCTTCCTAAACCCTCACCAATAATAAATAAGCTTGAGTATGAATAAGATATATAGATTAT
TAATTTTCCTTCCTTTTTTT

Downstream 100 bases:

>100_bases
ATATTATTTTTTGAAAAAATATTATTAATTTTTTTCGACCAATTATTTATCCATTTTTCATCAGACTTACTAAAACACTT
AGCACTCCAGCCTCCTATCA

Product: SMC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLGCVPNIIEENKVIQKINTLDMNIFSQSGEKIYSITSPDSSYNITELKFKLKKPTINIFKGEETKYIISSEESTLSDNN
KLLKLKGNVKLKTLKKDEDILYADTFIWNIEETNYLLEGNIRFENQNIILNSGKAILGSNNIIEFFNPVKYIIKDENNDN
KYEINSENAYYNLNTESVSFKAKDKRVKSIIYF

Sequences:

>Translated_193_residues
MLGCVPNIIEENKVIQKINTLDMNIFSQSGEKIYSITSPDSSYNITELKFKLKKPTINIFKGEETKYIISSEESTLSDNN
KLLKLKGNVKLKTLKKDEDILYADTFIWNIEETNYLLEGNIRFENQNIILNSGKAILGSNNIIEFFNPVKYIIKDENNDN
KYEINSENAYYNLNTESVSFKAKDKRVKSIIYF
>Mature_193_residues
MLGCVPNIIEENKVIQKINTLDMNIFSQSGEKIYSITSPDSSYNITELKFKLKKPTINIFKGEETKYIISSEESTLSDNN
KLLKLKGNVKLKTLKKDEDILYADTFIWNIEETNYLLEGNIRFENQNIILNSGKAILGSNNIIEFFNPVKYIIKDENNDN
KYEINSENAYYNLNTESVSFKAKDKRVKSIIYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22336; Mature: 22336

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGCVPNIIEENKVIQKINTLDMNIFSQSGEKIYSITSPDSSYNITELKFKLKKPTINIF
CCCCCCCHHHCCHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCEEEEE
KGEETKYIISSEESTLSDNNKLLKLKGNVKLKTLKKDEDILYADTFIWNIEETNYLLEGN
ECCCEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEEEEEEECCCEEEEEE
IRFENQNIILNSGKAILGSNNIIEFFNPVKYIIKDENNDNKYEINSENAYYNLNTESVSF
EEECCCEEEEECCCEEECCCCEEEECCCEEEEEECCCCCCEEEECCCCEEEEECCCEEEE
KAKDKRVKSIIYF
EECCCEEEEEECC
>Mature Secondary Structure
MLGCVPNIIEENKVIQKINTLDMNIFSQSGEKIYSITSPDSSYNITELKFKLKKPTINIF
CCCCCCCHHHCCHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCEEEEE
KGEETKYIISSEESTLSDNNKLLKLKGNVKLKTLKKDEDILYADTFIWNIEETNYLLEGN
ECCCEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEEEEEEECCCEEEEEE
IRFENQNIILNSGKAILGSNNIIEFFNPVKYIIKDENNDNKYEINSENAYYNLNTESVSF
EEECCCEEEEECCCEEECCCCEEEECCCEEEEEECCCCCCEEEECCCCEEEEECCCEEEE
KAKDKRVKSIIYF
EECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA