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The map label for this gene is 78779303

Identifier: 78779303

GI number: 78779303

Start: 852269

End: 852835

Strand: Direct

Name: 78779303

Synonym: PMT9312_0919

Alternate gene names: NA

Gene position: 852269-852835 (Clockwise)

Preceding gene: 78779302

Following gene: 78779304

Centisome position: 49.86

GC content: 27.16

Gene sequence:

>567_bases
TTGGCAGCTGAAGCATTTCTCTGGTTTAAATCACTTCACATTATTGGTGTAATCGTTTGGTTTGCGGGACTTTTTTATTT
AGTAAGACTTTTTATATATCATGAAGAATCTAAAAATATGGATAATGAATTAAAAATTGCCTTTAATAAACAATACACCT
TGATGGAAAAAAGGCTGGCTAATATTATCACAACACCTGGGATGATATTAGCTTTAAGTATGGCTATATGCATGGTTATT
ATGCAACCAAGTTGGTTAAGTGAGAAGTGGTTGCAAATTAAAATTTCTTTTGTTTTAGGATTAGTAATATATCATTCTTA
TTGTTACAAAATAATGTATTCATTACAAAATGGTACTTCAACCATTTCAGCAAAAAACCTTAGATTATTAAATGAATTGC
CTACTTTATTATTATTTATAATTGTACTTTTAGTAATTTTTAAAAATAATTTTCCAACTAGTATTGCTACATGGAGCGTA
GTTGGATTAATTATTTTCATGTTGGCTTCAATACAATTATATGCAAAGATTAGAAAGAAAAATGAGAATTCATTAAGTAA
TGAATAG

Upstream 100 bases:

>100_bases
AACGAGTTATAAATATTAATTAATTTTTGAAAAATAGATTTCTTGATCTTGTTAAATATAACTATATTAAAAATATATAT
TTTTAAATTAATCTATTAAT

Downstream 100 bases:

>100_bases
GGAAGACTTAGTAAAATTAACTTCCAATATTAATAAAAATAGTTGTCCTAAAAATATTAATTTTCACTGTCATACAAAAT
TTAGTGATGGAAGTCTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAAEAFLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLANIITTPGMILALSMAICMVI
MQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLQNGTSTISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSIATWSV
VGLIIFMLASIQLYAKIRKKNENSLSNE

Sequences:

>Translated_188_residues
MAAEAFLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLANIITTPGMILALSMAICMVI
MQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLQNGTSTISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSIATWSV
VGLIIFMLASIQLYAKIRKKNENSLSNE
>Mature_187_residues
AAEAFLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLANIITTPGMILALSMAICMVIM
QPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLQNGTSTISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSIATWSVV
GLIIFMLASIQLYAKIRKKNENSLSNE

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 21711; Mature: 21580

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEAFLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH
NIITTPGMILALSMAICMVIMQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLQNGTS
HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSIATWSVVGLIIFMLASIQLYAKIRKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NENSLSNE
CCCCCCCC
>Mature Secondary Structure 
AAEAFLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH
NIITTPGMILALSMAICMVIMQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLQNGTS
HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSIATWSVVGLIIFMLASIQLYAKIRKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NENSLSNE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]