Click here to switch to the map view.

The map label for this gene is 78778822

Identifier: 78778822

GI number: 78778822

Start: 413602

End: 414240

Strand: Direct

Name: 78778822

Synonym: PMT9312_0437

Alternate gene names: NA

Gene position: 413602-414240 (Clockwise)

Preceding gene: 78778821

Following gene: 78778823

Centisome position: 24.2

GC content: 30.36

Gene sequence:

>639_bases
ATGAGAATAAAAACAAAAAATGAAGCATTAAATATTGTCGAGACATCATATCTGGCATCACTTTCGTCATTATTATGGGT
TGCTTTATATTATTTGCCAATTGGGGGAGCTTTATTGAGGTTAATTTTACCTCTTCCAATGATCTTATTGCATTTGAGAA
GAGGAACTAAAACTGCATTGGAAGGACTCCTAATACAATTTTTACTTCTATTTATAATTATGGGCCCTGTTAGAGGAACC
TTATTTTTATTCCCCTATGGGATTTTGGCTTTTTGGTTAGGTTGGTGTTGGTTTAAAGAAAAAAGTTGGAGACTAAGTTT
AACCATTGGAGTTATTATTGGAACTCTAGGGTTCTTCTTACGCGTAATAGCATTATCTACGTTAGTTGGAGATAATCTTT
GGCTGTTAATTACTAGAGCAAGTTTTGGACTAATAGAAAAGTTTATTGGATTATTTAATTTACCTTTTTCGCCATCAATT
TTAAGTATCCAATTAGTTGCAATTTTATTAATAATTTTTCAAGAAATAGTTTATGTTTTAACAGTTTATATAGTTGCCTA
TTCTCTTTTCCCAAGATTAAAATTAACTATCCCAGATCCTCCAAGATTATTAAATACTCTAGTTGATTTAAATCATTGA

Upstream 100 bases:

>100_bases
GATTCTGAGGTAAATTTTGAAATAGAAAAGATTGAACGTATTTTAGATTCAAAAAATAAAATTATGAATAAAAATTAACT
CAAAATATTCAATAAAAAAA

Downstream 100 bases:

>100_bases
TAAAGAAATAAGAATGTATAGTACAGAATTAGGGATAAATCTTTTTGGAAGTGAATCCAATAAAAAAATACAACTCAACA
GAATAAAGATACTCCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRIKTKNEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGTKTALEGLLIQFLLLFIIMGPVRGT
LFLFPYGILAFWLGWCWFKEKSWRLSLTIGVIIGTLGFFLRVIALSTLVGDNLWLLITRASFGLIEKFIGLFNLPFSPSI
LSIQLVAILLIIFQEIVYVLTVYIVAYSLFPRLKLTIPDPPRLLNTLVDLNH

Sequences:

>Translated_212_residues
MRIKTKNEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGTKTALEGLLIQFLLLFIIMGPVRGT
LFLFPYGILAFWLGWCWFKEKSWRLSLTIGVIIGTLGFFLRVIALSTLVGDNLWLLITRASFGLIEKFIGLFNLPFSPSI
LSIQLVAILLIIFQEIVYVLTVYIVAYSLFPRLKLTIPDPPRLLNTLVDLNH
>Mature_212_residues
MRIKTKNEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGTKTALEGLLIQFLLLFIIMGPVRGT
LFLFPYGILAFWLGWCWFKEKSWRLSLTIGVIIGTLGFFLRVIALSTLVGDNLWLLITRASFGLIEKFIGLFNLPFSPSI
LSIQLVAILLIIFQEIVYVLTVYIVAYSLFPRLKLTIPDPPRLLNTLVDLNH

Specific function: Unknown

COG id: COG4241

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24044; Mature: 24044

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKTKNEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGTKTAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EGLLIQFLLLFIIMGPVRGTLFLFPYGILAFWLGWCWFKEKSWRLSLTIGVIIGTLGFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
RVIALSTLVGDNLWLLITRASFGLIEKFIGLFNLPFSPSILSIQLVAILLIIFQEIVYVL
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TVYIVAYSLFPRLKLTIPDPPRLLNTLVDLNH
HHHHHHHHHHCCEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRIKTKNEALNIVETSYLASLSSLLWVALYYLPIGGALLRLILPLPMILLHLRRGTKTAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EGLLIQFLLLFIIMGPVRGTLFLFPYGILAFWLGWCWFKEKSWRLSLTIGVIIGTLGFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
RVIALSTLVGDNLWLLITRASFGLIEKFIGLFNLPFSPSILSIQLVAILLIIFQEIVYVL
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TVYIVAYSLFPRLKLTIPDPPRLLNTLVDLNH
HHHHHHHHHHCCEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA