Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78778821

Identifier: 78778821

GI number: 78778821

Start: 412959

End: 413579

Strand: Direct

Name: 78778821

Synonym: PMT9312_0436

Alternate gene names: NA

Gene position: 412959-413579 (Clockwise)

Preceding gene: 78778820

Following gene: 78778822

Centisome position: 24.16

GC content: 19.16

Gene sequence:

>621_bases
ATGATTTTAAAAAAAAAAGAATTTTTTTTATTAATTTTTTTAATTTTAATGCAATCATGCTCAGGAGGGAGAATTGGGAA
TTTTCTTGAAAGTAGTTTTAATGATTTAGAAAAAATAAGCCAAGATGAAGATTTTCAAAAGAATTTAGAAAAACCAAAAT
CTGTTCTTGAAAATAAAAAGATTAATGAAAAAAATAATGAAAAAAGAAAAAAAATAGAAAAATCAAAATCTGTTCTTGAA
AATAAAAAGATTAATGAAAAAAATAATGAAAAAAGAAAAAAAATAGAAAAACCAAAATCTGTTCTTGAAAATAAAAAGAT
TAATGAAAAAAATAATGAAAAAAGAAAAAAAATAGAAAAATCAAAATCTGTTCTTGAAAATAAAAAAGAAATAAATTCTG
AAAAAATACAAAAACAAAAAAATAACAAAATTAAGAATTCTTCAAAAAAAAGAAAAATTGAGCTTCAATCTTACAAAATA
ATTTTCATACTGAAAGATGTAGATCCTAAAGATCCTACTGAAGAGTTAAGTACCATATTGAGTGATTCTGAGGTAAATTT
TGAAATAGAAAAGATTGAACGTATTTTAGATTCAAAAAATAAAATTATGAATAAAAATTAA

Upstream 100 bases:

>100_bases
TTGCTTCTGGATGAAAAACTAAAAGATAAAAAAGGATCTATTTCAAAAAAAATAAAAATAAGTAATAAAAAAATTGCAAG
AAAAAAGAAAAGTTAAAAAT

Downstream 100 bases:

>100_bases
CTCAAAATATTCAATAAAAAAAATGAGAATAAAAACAAAAAATGAAGCATTAAATATTGTCGAGACATCATATCTGGCAT
CACTTTCGTCATTATTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MILKKKEFFLLIFLILMQSCSGGRIGNFLESSFNDLEKISQDEDFQKNLEKPKSVLENKKINEKNNEKRKKIEKSKSVLE
NKKINEKNNEKRKKIEKPKSVLENKKINEKNNEKRKKIEKSKSVLENKKEINSEKIQKQKNNKIKNSSKKRKIELQSYKI
IFILKDVDPKDPTEELSTILSDSEVNFEIEKIERILDSKNKIMNKN

Sequences:

>Translated_206_residues
MILKKKEFFLLIFLILMQSCSGGRIGNFLESSFNDLEKISQDEDFQKNLEKPKSVLENKKINEKNNEKRKKIEKSKSVLE
NKKINEKNNEKRKKIEKPKSVLENKKINEKNNEKRKKIEKSKSVLENKKEINSEKIQKQKNNKIKNSSKKRKIELQSYKI
IFILKDVDPKDPTEELSTILSDSEVNFEIEKIERILDSKNKIMNKN
>Mature_206_residues
MILKKKEFFLLIFLILMQSCSGGRIGNFLESSFNDLEKISQDEDFQKNLEKPKSVLENKKINEKNNEKRKKIEKSKSVLE
NKKINEKNNEKRKKIEKPKSVLENKKINEKNNEKRKKIEKSKSVLENKKEINSEKIQKQKNNKIKNSSKKRKIELQSYKI
IFILKDVDPKDPTEELSTILSDSEVNFEIEKIERILDSKNKIMNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24397; Mature: 24397

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKKKEFFLLIFLILMQSCSGGRIGNFLESSFNDLEKISQDEDFQKNLEKPKSVLENKK
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
INEKNNEKRKKIEKSKSVLENKKINEKNNEKRKKIEKPKSVLENKKINEKNNEKRKKIEK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SKSVLENKKEINSEKIQKQKNNKIKNSSKKRKIELQSYKIIFILKDVDPKDPTEELSTIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCEEEEEEEECCCCCCHHHHHHHHH
SDSEVNFEIEKIERILDSKNKIMNKN
CCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILKKKEFFLLIFLILMQSCSGGRIGNFLESSFNDLEKISQDEDFQKNLEKPKSVLENKK
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
INEKNNEKRKKIEKSKSVLENKKINEKNNEKRKKIEKPKSVLENKKINEKNNEKRKKIEK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SKSVLENKKEINSEKIQKQKNNKIKNSSKKRKIELQSYKIIFILKDVDPKDPTEELSTIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCEEEEEEEECCCCCCHHHHHHHHH
SDSEVNFEIEKIERILDSKNKIMNKN
CCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA