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The map label for this gene is 78778746

Identifier: 78778746

GI number: 78778746

Start: 342817

End: 343440

Strand: Direct

Name: 78778746

Synonym: PMT9312_0361

Alternate gene names: NA

Gene position: 342817-343440 (Clockwise)

Preceding gene: 78778745

Following gene: 78778747

Centisome position: 20.06

GC content: 28.04

Gene sequence:

>624_bases
ATGAAAATAACAGAAAAACTTTGGGAGGATAATTATGAAATCGCTCTACTAAGTTTAAATACAAAATTTGTTCAAGGTTT
AAAAACTGGAAGACTGCCTAAAAATATTTTTCAAGAATATTTGGCTCAAGATTATTTCTTTTTAGAGACTTTTGCTAGGG
CATATGGTCTTGCCGTTTCTAAATCAAAAGATAAATATTCAATAAGGAAGTTAAGTGAACTTCTAATGGGTGTTTCAGAA
GAGTTAATACTTCATGAAACTTATGCAAAAGAATGGGATATTGATTTGTCTAATAACTATATAAAAAAAGCTACTAAAAA
TTATACAGATTTCCTTGATGATGTTTCCAAGAGACTTAGCTCCGTTGAAATAATGTTTGCAATGACTCCATGTATGCGAC
TTTATGCTTGGATAGGAAAAAGGTTGTATGAAGAGGATTTTGATAATAAATACAAAGAATGGATAATTACTTACTCTGAT
GAGAACTTTGAAAATTTAGCAAATTTACTCGAAAATCTTATTGAGACCAACAAAGAATCATATGATATTAATCAGGCAAA
ATATTTATACAAAAGAGCAATTGAATTAGAATTAGATTTTTTTAATGCATATTCAGATTTCTAA

Upstream 100 bases:

>100_bases
AGATATTTATTTCTTTAAATCCTGGCAACTTAAGTTTAAGTATGTATGTACAAAATATAAAAGATTTTAGAATAACTAAA
AATCAAAAAAAAAAAAAAAA

Downstream 100 bases:

>100_bases
TTTAAATTAAAATCTATTTATAGTACTTTTAAAGACGAGTTAATCAAATTATGTATTCTAAAGTTGTACTTTCAATAGGA
GGTAGTGACTCCGGAGGTGG

Product: TenA family transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKITEKLWEDNYEIALLSLNTKFVQGLKTGRLPKNIFQEYLAQDYFFLETFARAYGLAVSKSKDKYSIRKLSELLMGVSE
ELILHETYAKEWDIDLSNNYIKKATKNYTDFLDDVSKRLSSVEIMFAMTPCMRLYAWIGKRLYEEDFDNKYKEWIITYSD
ENFENLANLLENLIETNKESYDINQAKYLYKRAIELELDFFNAYSDF

Sequences:

>Translated_207_residues
MKITEKLWEDNYEIALLSLNTKFVQGLKTGRLPKNIFQEYLAQDYFFLETFARAYGLAVSKSKDKYSIRKLSELLMGVSE
ELILHETYAKEWDIDLSNNYIKKATKNYTDFLDDVSKRLSSVEIMFAMTPCMRLYAWIGKRLYEEDFDNKYKEWIITYSD
ENFENLANLLENLIETNKESYDINQAKYLYKRAIELELDFFNAYSDF
>Mature_207_residues
MKITEKLWEDNYEIALLSLNTKFVQGLKTGRLPKNIFQEYLAQDYFFLETFARAYGLAVSKSKDKYSIRKLSELLMGVSE
ELILHETYAKEWDIDLSNNYIKKATKNYTDFLDDVSKRLSSVEIMFAMTPCMRLYAWIGKRLYEEDFDNKYKEWIITYSD
ENFENLANLLENLIETNKESYDINQAKYLYKRAIELELDFFNAYSDF

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=198, Percent_Identity=28.7878787878788, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 24694; Mature: 24694

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITEKLWEDNYEIALLSLNTKFVQGLKTGRLPKNIFQEYLAQDYFFLETFARAYGLAVS
CCCHHHHCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSKDKYSIRKLSELLMGVSEELILHETYAKEWDIDLSNNYIKKATKNYTDFLDDVSKRLS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVEIMFAMTPCMRLYAWIGKRLYEEDFDNKYKEWIITYSDENFENLANLLENLIETNKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHCCCCC
YDINQAKYLYKRAIELELDFFNAYSDF
CCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKITEKLWEDNYEIALLSLNTKFVQGLKTGRLPKNIFQEYLAQDYFFLETFARAYGLAVS
CCCHHHHCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSKDKYSIRKLSELLMGVSEELILHETYAKEWDIDLSNNYIKKATKNYTDFLDDVSKRLS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVEIMFAMTPCMRLYAWIGKRLYEEDFDNKYKEWIITYSDENFENLANLLENLIETNKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHCCCCC
YDINQAKYLYKRAIELELDFFNAYSDF
CCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]