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The map label for this gene is ycbC [C]

Identifier: 78484758

GI number: 78484758

Start: 462306

End: 463124

Strand: Reverse

Name: ycbC [C]

Synonym: Tcr_0413

Alternate gene names: 78484758

Gene position: 463124-462306 (Counterclockwise)

Preceding gene: 78484760

Following gene: 78484757

Centisome position: 19.08

GC content: 44.44

Gene sequence:

>819_bases
ATGGATTCATTATTTTTTATAGTGTCAAAAATTGCGTGGGCTTTTTTAAGTCCCAGTAATATTATTTTAATCCTACTGAT
TCTGGGGTCTGTGTTTTTGCTTTTTAATAGAATCCAAACCGCAAAAACATTTCTGTTACCGGCCAGTTTAGCAGGGTTTA
TTGTGCTCGCTTTCCCTATTGGCGATTTGTTAATCCAGCCGTTAGAACAACGATTTAAAGCCCCTGACACCCTGCCGAAA
CACATAGACGGCATTATCGTTTTGGGCGGTGGCGAAGATCTTAAACGCAGCCTGAGCTGGGGACGCCCCGAACTCGGCAT
TGGCGGAGACCGTTACATTGGCGCCAAAGAACTCGCCACTCATTACCCTAAAGCTCCGGTTATCTTTACCGGCGGAAGTG
GCTCGATGCAGCTTCAAAACACACAAGGAGAAGGCAGTCTTGCACGCCAACTTCTCACTACGTTGGGAATTACCGATAAA
CGTTTAATTATTGAATCGCTTTCTCGCAATACCTATGAGAACTTTAAATTTACTAAAGCATTACTACCCGACGCCAATGG
CACCTACTTACTGGTCACCTCTGCCTTTCATATGCCTCGCTCGGTCGGCATTGCCAATAATCAAAACATTCACGTCATTC
CTTACCCAGTGGATTACCGCAGCAACAGTGAGAAACTACGCCAAATTGACTTTGATTTTTTTGACCACCTTAAGTCCCTT
GAACCCGCATGGAAAGAATGGATTGGCTTGACCGTTTATTACTGGACAGGCAAAACCTCAGATTGGTTTCCTGAAACCGT
ACACCCAACATACCAATAA

Upstream 100 bases:

>100_bases
CTTAAACACCCGATTCAAGACGCAACAACGCTGCTTTCGTTTCTGAACGGGGTCTTTCTCACATAAAATGTTTTAATCAA
GGCAGCTTAGGTTCTCCCAT

Downstream 100 bases:

>100_bases
GGTTGATATGCATTACACCACGCCCGAACTGAATATTTCTCAACTCTATCCATTACTGGTTGGTGGCATCATTCCTCGAC
CCATAGCCTGGGTCAGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MDSLFFIVSKIAWAFLSPSNIILILLILGSVFLLFNRIQTAKTFLLPASLAGFIVLAFPIGDLLIQPLEQRFKAPDTLPK
HIDGIIVLGGGEDLKRSLSWGRPELGIGGDRYIGAKELATHYPKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDK
RLIIESLSRNTYENFKFTKALLPDANGTYLLVTSAFHMPRSVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSL
EPAWKEWIGLTVYYWTGKTSDWFPETVHPTYQ

Sequences:

>Translated_272_residues
MDSLFFIVSKIAWAFLSPSNIILILLILGSVFLLFNRIQTAKTFLLPASLAGFIVLAFPIGDLLIQPLEQRFKAPDTLPK
HIDGIIVLGGGEDLKRSLSWGRPELGIGGDRYIGAKELATHYPKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDK
RLIIESLSRNTYENFKFTKALLPDANGTYLLVTSAFHMPRSVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSL
EPAWKEWIGLTVYYWTGKTSDWFPETVHPTYQ
>Mature_272_residues
MDSLFFIVSKIAWAFLSPSNIILILLILGSVFLLFNRIQTAKTFLLPASLAGFIVLAFPIGDLLIQPLEQRFKAPDTLPK
HIDGIIVLGGGEDLKRSLSWGRPELGIGGDRYIGAKELATHYPKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDK
RLIIESLSRNTYENFKFTKALLPDANGTYLLVTSAFHMPRSVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSL
EPAWKEWIGLTVYYWTGKTSDWFPETVHPTYQ

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=191, Percent_Identity=27.7486910994764, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30475; Mature: 30475

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLFFIVSKIAWAFLSPSNIILILLILGSVFLLFNRIQTAKTFLLPASLAGFIVLAFPI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDLLIQPLEQRFKAPDTLPKHIDGIIVLGGGEDLKRSLSWGRPELGIGGDRYIGAKELAT
HHHHHHHHHHHHCCCCCCHHHCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
HYPKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDKRLIIESLSRNTYENFKFTKA
HCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCEEHHH
LLPDANGTYLLVTSAFHMPRSVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSL
HCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHC
EPAWKEWIGLTVYYWTGKTSDWFPETVHPTYQ
CHHHHHHHCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSLFFIVSKIAWAFLSPSNIILILLILGSVFLLFNRIQTAKTFLLPASLAGFIVLAFPI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDLLIQPLEQRFKAPDTLPKHIDGIIVLGGGEDLKRSLSWGRPELGIGGDRYIGAKELAT
HHHHHHHHHHHHCCCCCCHHHCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
HYPKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDKRLIIESLSRNTYENFKFTKA
HCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCEEHHH
LLPDANGTYLLVTSAFHMPRSVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSL
HCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHC
EPAWKEWIGLTVYYWTGKTSDWFPETVHPTYQ
CHHHHHHHCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA