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The map label for this gene is 78484757

Identifier: 78484757

GI number: 78484757

Start: 461678

End: 462298

Strand: Reverse

Name: 78484757

Synonym: Tcr_0412

Alternate gene names: NA

Gene position: 462298-461678 (Counterclockwise)

Preceding gene: 78484758

Following gene: 78484753

Centisome position: 19.04

GC content: 46.7

Gene sequence:

>621_bases
ATGCATTACACCACGCCCGAACTGAATATTTCTCAACTCTATCCATTACTGGTTGGTGGCATCATTCCTCGACCCATAGC
CTGGGTCAGTACTCAAAGTTCACGAGGCATTGATAACTTAGCGCCTTATTCGTTTTTCAGTGTGGCCAGTTGCACCCCGC
CGGTTCTGACGGTGACACAAATTAACGCACAACCCGAGTCTGACAAAGACACCTTGCGCAATTTGAAAGACACACAAGAA
TGTGTCGTCAACATTGTCAGTGCCGATCTAGCCGAAGTTATGAATGCCTCCTGCGCGAATTACGACCAAAATGTGAGTGA
ATTTGAAGCGCTGAAAATTCCCGCCTGTGAGAGCCAAACGGTCAATGCCAAAGGGGTTGCACAAGCTAAGGTTCGCTATG
AATGTCGCTTAAAAGAAGTCATTACCCTATCTGACCAACCAGGCGGTGGAAAACTGATGTTACTGGATGTACTTCATATC
TATGTCGATGACACCCTGATTCAGGACGGAATGATTCAATCTGACAAATTAAACGCTATTGGGAAACTGGGTGGCAATGA
GTATACCGACGCCTCGGCCGATTTTGAGCTTGCCAGACCGGTTTTAGAGACGAATACTTAG

Upstream 100 bases:

>100_bases
GCATGGAAAGAATGGATTGGCTTGACCGTTTATTACTGGACAGGCAAAACCTCAGATTGGTTTCCTGAAACCGTACACCC
AACATACCAATAAGGTTGAT

Downstream 100 bases:

>100_bases
ATATGAGTACATAATGAAATCTGGCCAGGCCTGGCCAGATTTATCATCCATCAACGTTAGTGCTGATACGCTTTGTGTGA
TAAATACAATGCGAGTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MHYTTPELNISQLYPLLVGGIIPRPIAWVSTQSSRGIDNLAPYSFFSVASCTPPVLTVTQINAQPESDKDTLRNLKDTQE
CVVNIVSADLAEVMNASCANYDQNVSEFEALKIPACESQTVNAKGVAQAKVRYECRLKEVITLSDQPGGGKLMLLDVLHI
YVDDTLIQDGMIQSDKLNAIGKLGGNEYTDASADFELARPVLETNT

Sequences:

>Translated_206_residues
MHYTTPELNISQLYPLLVGGIIPRPIAWVSTQSSRGIDNLAPYSFFSVASCTPPVLTVTQINAQPESDKDTLRNLKDTQE
CVVNIVSADLAEVMNASCANYDQNVSEFEALKIPACESQTVNAKGVAQAKVRYECRLKEVITLSDQPGGGKLMLLDVLHI
YVDDTLIQDGMIQSDKLNAIGKLGGNEYTDASADFELARPVLETNT
>Mature_206_residues
MHYTTPELNISQLYPLLVGGIIPRPIAWVSTQSSRGIDNLAPYSFFSVASCTPPVLTVTQINAQPESDKDTLRNLKDTQE
CVVNIVSADLAEVMNASCANYDQNVSEFEALKIPACESQTVNAKGVAQAKVRYECRLKEVITLSDQPGGGKLMLLDVLHI
YVDDTLIQDGMIQSDKLNAIGKLGGNEYTDASADFELARPVLETNT

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22439; Mature: 22439

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYTTPELNISQLYPLLVGGIIPRPIAWVSTQSSRGIDNLAPYSFFSVASCTPPVLTVTQ
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
INAQPESDKDTLRNLKDTQECVVNIVSADLAEVMNASCANYDQNVSEFEALKIPACESQT
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCCC
VNAKGVAQAKVRYECRLKEVITLSDQPGGGKLMLLDVLHIYVDDTLIQDGMIQSDKLNAI
CCCCCCHHHHHHHHEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GKLGGNEYTDASADFELARPVLETNT
HHCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MHYTTPELNISQLYPLLVGGIIPRPIAWVSTQSSRGIDNLAPYSFFSVASCTPPVLTVTQ
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
INAQPESDKDTLRNLKDTQECVVNIVSADLAEVMNASCANYDQNVSEFEALKIPACESQT
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCCC
VNAKGVAQAKVRYECRLKEVITLSDQPGGGKLMLLDVLHIYVDDTLIQDGMIQSDKLNAI
CCCCCCHHHHHHHHEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GKLGGNEYTDASADFELARPVLETNT
HHCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]