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The map label for this gene is 78484723

Identifier: 78484723

GI number: 78484723

Start: 427838

End: 428455

Strand: Reverse

Name: 78484723

Synonym: Tcr_0378

Alternate gene names: NA

Gene position: 428455-427838 (Counterclockwise)

Preceding gene: 78484727

Following gene: 78484722

Centisome position: 17.65

GC content: 34.47

Gene sequence:

>618_bases
ATGTACTCTCCAGCCAGAAAAATCAAGAAGTCTTCTGTCAAAAATATTGTCAGATTTCCTTCATCTAAAAATAATCGTAC
CTTACTTCTTGAGTCGATATTAGAATCCCAATTCGCCCTATTGCTTGAATATGACAATAGTGTAGAAGCATATTTTGAAC
AACCAGAAACATTCGTCTTACAAACTGAAACCAACACAAAACATAAGTACACTCCAGACTTCTTAATTGCCTTTAAAAAT
GGTCAACGCAAGTACATTGAGGTCAAGCCTAGGAGTGAGATCGAGTCAGGAAAATTTTCCACAGTTTTTGAGCTCTTTAA
ACAAAAGACAACTCAATTAGGAGATAACTTTGAAGTTTTGAGCGAAGAGGTCATTCAACGGGAACCATTGCTTCAAAACC
TCAAATACTTTTATAGGTTCAGAAAGCATAAAACAATAAATATAAAACTTTTTGAGGAACTCTCAAACCACATAACAACT
CCAATAACTTTTAAAGAACTATCTCTGTCCTATGATTTAAAGTCGCTATATCAGCTCATTGCATTTGGATATATAAAGTT
TGACATCAATAACGAACCTTTTTCGGTGAATTCGGAGGTATGGTTCAGTGAAGAATGA

Upstream 100 bases:

>100_bases
AAAAATATAATTTTGTCACAAAAATTATAATTTCACTATTATTTAGCATTATTCAGAAGTACTATAACTCTATACTTCAA
GAGGAGCATAGTATTTCAAA

Downstream 100 bases:

>100_bases
CTTATTCTCTGTCGGGTCAGTTTTCAACCTTGAAAACAATCAATTTATTGTCTCACAAACAAAAAAAGATGGGTTCAAAG
CATCCAATCTTCGAAATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: TnsA Endonuclease N Terminal Domain Family Protein

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYSPARKIKKSSVKNIVRFPSSKNNRTLLLESILESQFALLLEYDNSVEAYFEQPETFVLQTETNTKHKYTPDFLIAFKN
GQRKYIEVKPRSEIESGKFSTVFELFKQKTTQLGDNFEVLSEEVIQREPLLQNLKYFYRFRKHKTINIKLFEELSNHITT
PITFKELSLSYDLKSLYQLIAFGYIKFDINNEPFSVNSEVWFSEE

Sequences:

>Translated_205_residues
MYSPARKIKKSSVKNIVRFPSSKNNRTLLLESILESQFALLLEYDNSVEAYFEQPETFVLQTETNTKHKYTPDFLIAFKN
GQRKYIEVKPRSEIESGKFSTVFELFKQKTTQLGDNFEVLSEEVIQREPLLQNLKYFYRFRKHKTINIKLFEELSNHITT
PITFKELSLSYDLKSLYQLIAFGYIKFDINNEPFSVNSEVWFSEE
>Mature_205_residues
MYSPARKIKKSSVKNIVRFPSSKNNRTLLLESILESQFALLLEYDNSVEAYFEQPETFVLQTETNTKHKYTPDFLIAFKN
GQRKYIEVKPRSEIESGKFSTVFELFKQKTTQLGDNFEVLSEEVIQREPLLQNLKYFYRFRKHKTINIKLFEELSNHITT
PITFKELSLSYDLKSLYQLIAFGYIKFDINNEPFSVNSEVWFSEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24288; Mature: 24288

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSPARKIKKSSVKNIVRFPSSKNNRTLLLESILESQFALLLEYDNSVEAYFEQPETFVL
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHCCCCEEEE
QTETNTKHKYTPDFLIAFKNGQRKYIEVKPRSEIESGKFSTVFELFKQKTTQLGDNFEVL
EECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
SEEVIQREPLLQNLKYFYRFRKHKTINIKLFEELSNHITTPITFKELSLSYDLKSLYQLI
HHHHHHHCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCEEHHHHCCCCCHHHHHHHH
AFGYIKFDINNEPFSVNSEVWFSEE
HHEEEEEEECCCCEECCCCEEECCC
>Mature Secondary Structure
MYSPARKIKKSSVKNIVRFPSSKNNRTLLLESILESQFALLLEYDNSVEAYFEQPETFVL
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHCCCCEEEE
QTETNTKHKYTPDFLIAFKNGQRKYIEVKPRSEIESGKFSTVFELFKQKTTQLGDNFEVL
EECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
SEEVIQREPLLQNLKYFYRFRKHKTINIKLFEELSNHITTPITFKELSLSYDLKSLYQLI
HHHHHHHCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCEEHHHHCCCCCHHHHHHHH
AFGYIKFDINNEPFSVNSEVWFSEE
HHEEEEEEECCCCEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA