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The map label for this gene is 78484478

Identifier: 78484478

GI number: 78484478

Start: 166579

End: 168153

Strand: Reverse

Name: 78484478

Synonym: Tcr_0133

Alternate gene names: NA

Gene position: 168153-166579 (Counterclockwise)

Preceding gene: 78484486

Following gene: 78484472

Centisome position: 6.93

GC content: 44.57

Gene sequence:

>1575_bases
ATGAACGCCTCTTTACTTGAAAAAATCGAACAACTCAATCAAGTCGGCATCGCACTTTCTGCTGAAAGCGACACCCCCAC
TCTCTTGCAACAAATATTAACCAGTGCACAAGCATTAACCCACGCCGATGGCGGAACCTTATATCGAGTGATCGACCAAC
AAATGCTCCATTTTGACGTGGTGCAAAACACCTCTCTTGGGATTCAGCTCGGTGGAAATCATCCAGAGCCGATTGCATTT
CCGGCGATCCCCTTAACACGGTCTTCGGGCGATGAAAACCTAACAACGGTTTCCAGCTATGTCGCCATCAAAGGTGAGAC
GGTTAATATTAAAGATATCTACGCCGATCACGATTTTGATTTCTCTGGAGCGTTGGCATTTGACCAACAAGTCCATTACC
GAACACAATCAATGCTGACCATTCCCCTGAAAAATTTCGATCATGACGTCATCGGCGTATTGCAGCTGATCAATGCAACC
GACCAGGAAGGACAAGTTATCCCCTTCTCGGAAGAATCTGAAAGCTTAGCGCGCTCTTTAGCTTCGCAGGCCTCTGTGGC
CTTGACCAATCGCCAGCTTATTAATGAGCATAAGCAGCTTTTTGAGGCCTTCAGTAAAATGGTGGCCGACGCCATTGATA
AAAAATCCCCTTATACCGGCGAACACTGCCAAAGAGTTCCGGTCATAACCATGATGCTGGCAGAAGCGGCTTCTCAATCA
AACCACCCTGATTTTGAAAATTTTCAGATGGATGAAAGCGATTTGTTTGAATTGGAAACGGCGGCCTGGCTTCATGACTG
CGGTAAGTTAACGACACCTGAATACATTATGGATAAATCCACTAAGCTGGAAACCGTCTTCGATCGCATTGAACTCATCA
AAACCCGCTTAAACTTAAAGGCGTTTCAATCACTAGCCGAGCAATACGAGATTCCTCTAGAAGACATTAAAGCCTCCCAA
AAAAAGCATTACGAGCTTTACCAGCGACTTCAGGACATCAATATTGGCAAGGAATTCTTTAATGAAGCGTCTGCGACATT
TTTAAAAACCGTTCAATCTGAAACCTATCGCACACTGGAAGGCTCTAAACAGCCCATGTTGAATGAGGATGAATTTCTTA
ACCTAAACATTTCCCGAGGCACGCTCAATGATGAAGAGCGAACCATCATGCAGGATCATGCCGCCATGTCGATTCATATG
TTGGATATTTTGCCCTTTCCTAAGGAATTACAACGCGTTTCTGAATACGCTGGCGGCCACCATGAAAGAATGGATGGCAA
AGGATATCCCAACCAACTGACACGAGAAGATCTTTCAATTCCGGCTAGAATCATGGGAATTGCAGATATTTTTGAAGCCC
TATCCGCTGGCGATCGGCCTTATAAAAAAGCGAAAAGCCTTTCTGAGTGCTTACGTATTTTAGGGTTCATGAAACAAGAC
GGCCATATTGACCCGGATTTATTCAATCTCTTTATCCGAGAAAAAGTCTATTTGACTTATGCTAAGGCTTATCTGAAACC
CAGTCAGATCGATGAGGTGGACCCCAATCAAATTCCTGGATATGAAGCAACTTGA

Upstream 100 bases:

>100_bases
TTATTATGAGCCATTATTTGACGCAAAAGACGCCTTTAAACACAATTTACATTATAAATAAATTATGTCAAACTGAGCTT
CCGATTTCAGAAGGTTTCCA

Downstream 100 bases:

>100_bases
AAAAATTTCAGGCATAAAAAAAGGCTCCAAACAGGAGCCTTTTTAAATCACATCAAATATTACTGAAAAGCCACTCTAAC
ACCAAGGTGCAGGCTGTCAT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase; Chemotaxis Sensory Transducer Family Protein; GAF Domain-Containing Protein; HAMP Domain Protein; Response Regulator; HDIG Domain-Containing Protein; HD-GYP Domain-Containing Protein; Methyl-Accepting Chemotaxis Protein; HD Domain-Containing Protein; GAF Domain/HD Domain-Containing Protein; Two-Component System Response Regulator; HD Domain Protein; Metal-Dependent Phosphohydrolase HD Subdomain; GAF Domain Protein; Metal Dependent Phosphohydrolase HD Region; Chemotactic Transducer-Related Protein; Metal-Dependent Phosphohydrolase HD Region; Response Regulator CheB; Two-Component Response Receiver And Regulator Protein; HD-Domain-Containing Protein; Metal-Dependent Phosphohydrolase Hd Subdomain; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Integral Membrane Protein Two-Component Signal Transducer; HAMP Domain-Containing Protein; Two-Component Response Regulator; ABC-Type Amino Acid Transport Signal Transduction Systems; HAMP Domain/GAF Domain/HD Domain-Containing Protein; Fused HD-GYP/HD-Hydrolase Domain-Containing Protein; Metal Dependent Phosphohydrolase With Gaf Sensor; HD-GYP/GAF Domain-Containing Protein; Response Regulator/Phosphatase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; GAF Domain/HD Domain Protein; GAF Containing Protein; HD-GYP Domain Protein; Diguanylate Cyclase; Chemotaxis Protein; Replicative DNA Helicase; HDIG Domain Protein; Ggdef Domain/Hd Domain Protein; Two Component Response Regulator; PAS/PAC Sensor Protein; Response Regulator With HD-GYP Domain; Response Regulator Receiver; Metal Dependent Phophohydrolase; Response Regulator Receiver Protein; Two-Component Regulatory System Response Regulator; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MNASLLEKIEQLNQVGIALSAESDTPTLLQQILTSAQALTHADGGTLYRVIDQQMLHFDVVQNTSLGIQLGGNHPEPIAF
PAIPLTRSSGDENLTTVSSYVAIKGETVNIKDIYADHDFDFSGALAFDQQVHYRTQSMLTIPLKNFDHDVIGVLQLINAT
DQEGQVIPFSEESESLARSLASQASVALTNRQLINEHKQLFEAFSKMVADAIDKKSPYTGEHCQRVPVITMMLAEAASQS
NHPDFENFQMDESDLFELETAAWLHDCGKLTTPEYIMDKSTKLETVFDRIELIKTRLNLKAFQSLAEQYEIPLEDIKASQ
KKHYELYQRLQDINIGKEFFNEASATFLKTVQSETYRTLEGSKQPMLNEDEFLNLNISRGTLNDEERTIMQDHAAMSIHM
LDILPFPKELQRVSEYAGGHHERMDGKGYPNQLTREDLSIPARIMGIADIFEALSAGDRPYKKAKSLSECLRILGFMKQD
GHIDPDLFNLFIREKVYLTYAKAYLKPSQIDEVDPNQIPGYEAT

Sequences:

>Translated_524_residues
MNASLLEKIEQLNQVGIALSAESDTPTLLQQILTSAQALTHADGGTLYRVIDQQMLHFDVVQNTSLGIQLGGNHPEPIAF
PAIPLTRSSGDENLTTVSSYVAIKGETVNIKDIYADHDFDFSGALAFDQQVHYRTQSMLTIPLKNFDHDVIGVLQLINAT
DQEGQVIPFSEESESLARSLASQASVALTNRQLINEHKQLFEAFSKMVADAIDKKSPYTGEHCQRVPVITMMLAEAASQS
NHPDFENFQMDESDLFELETAAWLHDCGKLTTPEYIMDKSTKLETVFDRIELIKTRLNLKAFQSLAEQYEIPLEDIKASQ
KKHYELYQRLQDINIGKEFFNEASATFLKTVQSETYRTLEGSKQPMLNEDEFLNLNISRGTLNDEERTIMQDHAAMSIHM
LDILPFPKELQRVSEYAGGHHERMDGKGYPNQLTREDLSIPARIMGIADIFEALSAGDRPYKKAKSLSECLRILGFMKQD
GHIDPDLFNLFIREKVYLTYAKAYLKPSQIDEVDPNQIPGYEAT
>Mature_524_residues
MNASLLEKIEQLNQVGIALSAESDTPTLLQQILTSAQALTHADGGTLYRVIDQQMLHFDVVQNTSLGIQLGGNHPEPIAF
PAIPLTRSSGDENLTTVSSYVAIKGETVNIKDIYADHDFDFSGALAFDQQVHYRTQSMLTIPLKNFDHDVIGVLQLINAT
DQEGQVIPFSEESESLARSLASQASVALTNRQLINEHKQLFEAFSKMVADAIDKKSPYTGEHCQRVPVITMMLAEAASQS
NHPDFENFQMDESDLFELETAAWLHDCGKLTTPEYIMDKSTKLETVFDRIELIKTRLNLKAFQSLAEQYEIPLEDIKASQ
KKHYELYQRLQDINIGKEFFNEASATFLKTVQSETYRTLEGSKQPMLNEDEFLNLNISRGTLNDEERTIMQDHAAMSIHM
LDILPFPKELQRVSEYAGGHHERMDGKGYPNQLTREDLSIPARIMGIADIFEALSAGDRPYKKAKSLSECLRILGFMKQD
GHIDPDLFNLFIREKVYLTYAKAYLKPSQIDEVDPNQIPGYEAT

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59077; Mature: 59077

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASLLEKIEQLNQVGIALSAESDTPTLLQQILTSAQALTHADGGTLYRVIDQQMLHFDV
CCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VQNTSLGIQLGGNHPEPIAFPAIPLTRSSGDENLTTVSSYVAIKGETVNIKDIYADHDFD
HCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHEEEEECCEEEEEEEECCCCCC
FSGALAFDQQVHYRTQSMLTIPLKNFDHDVIGVLQLINATDQEGQVIPFSEESESLARSL
CCCCEEHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHH
ASQASVALTNRQLINEHKQLFEAFSKMVADAIDKKSPYTGEHCQRVPVITMMLAEAASQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
NHPDFENFQMDESDLFELETAAWLHDCGKLTTPEYIMDKSTKLETVFDRIELIKTRLNLK
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFQSLAEQYEIPLEDIKASQKKHYELYQRLQDINIGKEFFNEASATFLKTVQSETYRTLE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GSKQPMLNEDEFLNLNISRGTLNDEERTIMQDHAAMSIHMLDILPFPKELQRVSEYAGGH
CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHCCCC
HERMDGKGYPNQLTREDLSIPARIMGIADIFEALSAGDRPYKKAKSLSECLRILGFMKQD
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GHIDPDLFNLFIREKVYLTYAKAYLKPSQIDEVDPNQIPGYEAT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNASLLEKIEQLNQVGIALSAESDTPTLLQQILTSAQALTHADGGTLYRVIDQQMLHFDV
CCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VQNTSLGIQLGGNHPEPIAFPAIPLTRSSGDENLTTVSSYVAIKGETVNIKDIYADHDFD
HCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHEEEEECCEEEEEEEECCCCCC
FSGALAFDQQVHYRTQSMLTIPLKNFDHDVIGVLQLINATDQEGQVIPFSEESESLARSL
CCCCEEHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHH
ASQASVALTNRQLINEHKQLFEAFSKMVADAIDKKSPYTGEHCQRVPVITMMLAEAASQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
NHPDFENFQMDESDLFELETAAWLHDCGKLTTPEYIMDKSTKLETVFDRIELIKTRLNLK
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFQSLAEQYEIPLEDIKASQKKHYELYQRLQDINIGKEFFNEASATFLKTVQSETYRTLE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GSKQPMLNEDEFLNLNISRGTLNDEERTIMQDHAAMSIHMLDILPFPKELQRVSEYAGGH
CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHCCCC
HERMDGKGYPNQLTREDLSIPARIMGIADIFEALSAGDRPYKKAKSLSECLRILGFMKQD
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GHIDPDLFNLFIREKVYLTYAKAYLKPSQIDEVDPNQIPGYEAT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA