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The map label for this gene is 78484452

Identifier: 78484452

GI number: 78484452

Start: 137710

End: 138120

Strand: Reverse

Name: 78484452

Synonym: Tcr_0107

Alternate gene names: NA

Gene position: 138120-137710 (Counterclockwise)

Preceding gene: 78484455

Following gene: 78484449

Centisome position: 5.69

GC content: 43.07

Gene sequence:

>411_bases
ATGCATTTAATCGAAAATGAATTCGAGCAAAAATTGCTCCATGAACTCCCGCCTCATGCACGGGACATTGGACTGGATTT
AGTCAGTACTCGATCGTTAGGTGAATTATTAGTGATGCTGGATGAAAACCAGGTCGATAAGGAATTGCTGGCCGTCAAAA
AAGTGCCTTCCACCATGTGGGAGCCCATTTTAAGAGCGGCATTACTCGCTAAGGCAACTTATTTTTTACCGAACCCGGAG
TTGTCGCAAGAAGAAATGCTGTTTTTACTTAAGGCAGCTTGTATGAGTGCCGGCTACCCATTATCGGAATATTCTTTAGC
AGACCTCATTGAACTGACGGAAGACGAAATGCCAGTTTTTCATCGATGGTTACTGCAATTGACCAAAAACTTACAAGAAA
AGCGTGCTTGA

Upstream 100 bases:

>100_bases
ATTTCTTATATTTGTGGCAAAGCATTATCTTACAAGGTTCTGAATTGGTACAATGAAAATTATTTATCTAACCATTACAA
ATATATAAGTTAATTTTCCT

Downstream 100 bases:

>100_bases
TCTGTTAAATTGAAGTGGTGCCCCTTTGATTGGGATCAACCATGAGAACTTGCCAGTGATTTTTTAATGTTTAAACGCGC
GACCGGGTTGCCGTAATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHLIENEFEQKLLHELPPHARDIGLDLVSTRSLGELLVMLDENQVDKELLAVKKVPSTMWEPILRAALLAKATYFLPNPE
LSQEEMLFLLKAACMSAGYPLSEYSLADLIELTEDEMPVFHRWLLQLTKNLQEKRA

Sequences:

>Translated_136_residues
MHLIENEFEQKLLHELPPHARDIGLDLVSTRSLGELLVMLDENQVDKELLAVKKVPSTMWEPILRAALLAKATYFLPNPE
LSQEEMLFLLKAACMSAGYPLSEYSLADLIELTEDEMPVFHRWLLQLTKNLQEKRA
>Mature_136_residues
MHLIENEFEQKLLHELPPHARDIGLDLVSTRSLGELLVMLDENQVDKELLAVKKVPSTMWEPILRAALLAKATYFLPNPE
LSQEEMLFLLKAACMSAGYPLSEYSLADLIELTEDEMPVFHRWLLQLTKNLQEKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15628; Mature: 15628

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLIENEFEQKLLHELPPHARDIGLDLVSTRSLGELLVMLDENQVDKELLAVKKVPSTMW
CCCCHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
EPILRAALLAKATYFLPNPELSQEEMLFLLKAACMSAGYPLSEYSLADLIELTEDEMPVF
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
HRWLLQLTKNLQEKRA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHLIENEFEQKLLHELPPHARDIGLDLVSTRSLGELLVMLDENQVDKELLAVKKVPSTMW
CCCCHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
EPILRAALLAKATYFLPNPELSQEEMLFLLKAACMSAGYPLSEYSLADLIELTEDEMPVF
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
HRWLLQLTKNLQEKRA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA