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The map label for this gene is yjbQ [C]

Identifier: 78484411

GI number: 78484411

Start: 79637

End: 80056

Strand: Reverse

Name: yjbQ [C]

Synonym: Tcr_0065

Alternate gene names: 78484411

Gene position: 80056-79637 (Counterclockwise)

Preceding gene: 78484417

Following gene: 78484409

Centisome position: 3.3

GC content: 41.67

Gene sequence:

>420_bases
ATGAAAATCTACCAGACGACCTTAGCGTTTCACACTTCAAACCGCGGTACATTTAATATTACAGATGATATTGATGACGT
TATAGCGGAATCGGATATCAGTATCGGTCTTTGCCATGTCTTTTGCCAACATACCTCGGCCTCTTTAATTGTGACAGAGA
ACGCCGATCCGACCGTTCGCCAGGATATTGAATATTGGATGAAAAAGAATGTCATCGATGGCGACCGGAACTTTCATCAT
AATTATGAAGGCGATGATGATATGTCTGGCCATATTCGGACAATTTTGACAGAAACCAGTCACACCCTTCCCATTTCAAA
CGGCGAACTGAATTTGGGAACATGGCAAGGTCTCTTTTTATATGAACATCGTATTGGACGCTTTAATCGACAGGTTATCG
TGACCATTCAAGGAGAATAA

Upstream 100 bases:

>100_bases
CCATGATTCTAACCCATAACAATATTTGGATTCCAAATTTAAAATAGGTAATATTAAGAATAATTAATCTTTGATTTTAT
TATAAATTTGGACAGACTCA

Downstream 100 bases:

>100_bases
AAATGACCCAAGAAGTACTAGATCCAGTTCATTTCGTTCTAAAAGTCAAAGGCAAACACAACCTGATTTTTAAAACCAAA
CATAATGATCCGAGTTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKIYQTTLAFHTSNRGTFNITDDIDDVIAESDISIGLCHVFCQHTSASLIVTENADPTVRQDIEYWMKKNVIDGDRNFHH
NYEGDDDMSGHIRTILTETSHTLPISNGELNLGTWQGLFLYEHRIGRFNRQVIVTIQGE

Sequences:

>Translated_139_residues
MKIYQTTLAFHTSNRGTFNITDDIDDVIAESDISIGLCHVFCQHTSASLIVTENADPTVRQDIEYWMKKNVIDGDRNFHH
NYEGDDDMSGHIRTILTETSHTLPISNGELNLGTWQGLFLYEHRIGRFNRQVIVTIQGE
>Mature_139_residues
MKIYQTTLAFHTSNRGTFNITDDIDDVIAESDISIGLCHVFCQHTSASLIVTENADPTVRQDIEYWMKKNVIDGDRNFHH
NYEGDDDMSGHIRTILTETSHTLPISNGELNLGTWQGLFLYEHRIGRFNRQVIVTIQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=137, Percent_Identity=45.985401459854, Blast_Score=125, Evalue=2e-30,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=38.9705882352941, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=38.9705882352941, Blast_Score=106, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15882; Mature: 15882

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYQTTLAFHTSNRGTFNITDDIDDVIAESDISIGLCHVFCQHTSASLIVTENADPTVR
CEEEEEEEEEEECCCCEEEECCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCHHH
QDIEYWMKKNVIDGDRNFHHNYEGDDDMSGHIRTILTETSHTLPISNGELNLGTWQGLFL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCCEEEE
YEHRIGRFNRQVIVTIQGE
EEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MKIYQTTLAFHTSNRGTFNITDDIDDVIAESDISIGLCHVFCQHTSASLIVTENADPTVR
CEEEEEEEEEEECCCCEEEECCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCHHH
QDIEYWMKKNVIDGDRNFHHNYEGDDDMSGHIRTILTETSHTLPISNGELNLGTWQGLFL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCCEEEE
YEHRIGRFNRQVIVTIQGE
EEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]