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The map label for this gene is 78484417

Identifier: 78484417

GI number: 78484417

Start: 89481

End: 91181

Strand: Reverse

Name: 78484417

Synonym: Tcr_0071

Alternate gene names: NA

Gene position: 91181-89481 (Counterclockwise)

Preceding gene: 78484418

Following gene: 78484411

Centisome position: 3.76

GC content: 45.03

Gene sequence:

>1701_bases
ATGTTGAGTCAGACTATGGATCGAAACACTAAACAGCAACACTGGCTAACCAAACTTATTTTGATTACCCTCGCCCTTAT
TTTAATTTTGTTATTGAGCACACAAGTGTTTGCAAAAAGTGTCACGGTGAAGATTGATCATCAAAGCGTTGAAATGGGCG
ACATTATTTCAGTGGTCATAAAGACGGACTTTCAAACCTTCGAAACCCCTGATTTTTCCGGGTTAAAAGATCAATTTGAT
ATTCTGGGCACGCAACGAAGTAGCCAGATTGAAATCATCAATGGTAACTACCAGTCCTACTCACGATGGGATTTACGGCT
CACCCCAAAACAGATAGGTGACCTAGTGATTCCGCCGCTTACAATCGGCGGGGTGATGAGTGAACCCCATATTATCAAAG
TAACCGAAAATAAAATGGTGCCGGGTGTCGAGAAAGGAAGCAGCTTTTTGGAATCAAGCATCAATCTGACCAGCCCTTAT
GTGCAACAGGAAGTGCTTTTCACTTTACGGTTTTATCATTTAGGACAGTTCATTAATGGCAACATTCGTCCACCGACCTT
TCATCAAGCCATCACCGAAAATATTCGGAACCAATTCCACTACCAAAAAAACGTTAACGGGCGACTCTATGATGTTTACG
AATGGACTTGGGCTTTTTATCCTCAAAAAAGCGGCCCGATGGTCATTCCGCCGCAAAGTTTCAACGGTAGAATTCAATAC
CGAGGACAGCTGAAAGCCGTTAAAGATCAAACGCAATCCATTGAGTTGAAGGTTCTGCCAAAACCCAAAAGTTACCCGAC
CAATTCGGCTTGGTTGCCCGCCAAAGAAGTGACTTTGAAGGACGATTTACAAACGTCGACGCCAGTCAGAGTGGGGGATT
CGATTACAAGAACGCTCTCATTAAAAGCGGAAGGATTACTCGCCTCGCAACTTCCAGAGTTTCAATTTAAAGACCAAGCG
GGATTCCACGTTTACCCAGACAAGGCAACCAATAATAACCAGAAAACCGAACAAGGAATGCTGAGCCAAAAACTTCAGAA
AATCGCCATTGTTCCAACGCGAGCCGGCCATGTGACCTTGCCGGCTATCACGGTCAGCTGGTGGAATACACAAACCAATC
AATTGGAAACGCAGACGTTAGCCGAAAAAACCATCCGTGTCTTGCCGGCCGTAAACAAACAACAAAATCCTTTTGACACC
ATGACCCCCGAACCGGTTACTGAACCTAAACCGATGATGAGCTCATCAGATAATACAGGCGTTTGGCAGAGCGCTGCCGG
GCTGTTTGCTGTGCTATGGATCCTCAGCAGTGGCCTGGCAATTCACTTTTATCGAAAAAGAAAAATTACAGCCATTGCGA
CTGTTGACTCAGAATCGGACAAAAACAGCCAGGCCTGGCCAGATAATCATCCTGCACTGGAAAAGCTATGCCAAGGAAAT
AAAAACGGTGTGAAGGATGCTAGAATGCTTTATCCTGCCATTTTAGCCTGGCAACAACGCTATCCAGAAAAAGAAAATGA
GACGTTTAAAACACATTTGCAGGCCTTAAAAGCGCATTTGTATCACCAAGCAGACTTGCCGCCAGACACACTGAGCGCTC
TGTGCGATGACATCGCCCGTTTGAGTGCACAACAACCCAAGTCTTCAAAGAAGACTGGAAAGCACCTTGATCCTCTGTAC
CCAAATGAAGTTGATGCTTAG

Upstream 100 bases:

>100_bases
CGTAAATTTGAATACCAATATCAGCAACAAGGCTCCAAAACGGATCGTGAACCCGATAAAATCTGGTAACGATTACAATG
GCATTGTTCTTTTAACCGAA

Downstream 100 bases:

>100_bases
GCAATGATACTGTCTGGCAAATGCGGTCAATTACGTTTCGAAATGACCGTCTGCAATTTTTTGCACTTCCGGGTAATTGG
TTTTTCCGGTGCCTAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MLSQTMDRNTKQQHWLTKLILITLALILILLLSTQVFAKSVTVKIDHQSVEMGDIISVVIKTDFQTFETPDFSGLKDQFD
ILGTQRSSQIEIINGNYQSYSRWDLRLTPKQIGDLVIPPLTIGGVMSEPHIIKVTENKMVPGVEKGSSFLESSINLTSPY
VQQEVLFTLRFYHLGQFINGNIRPPTFHQAITENIRNQFHYQKNVNGRLYDVYEWTWAFYPQKSGPMVIPPQSFNGRIQY
RGQLKAVKDQTQSIELKVLPKPKSYPTNSAWLPAKEVTLKDDLQTSTPVRVGDSITRTLSLKAEGLLASQLPEFQFKDQA
GFHVYPDKATNNNQKTEQGMLSQKLQKIAIVPTRAGHVTLPAITVSWWNTQTNQLETQTLAEKTIRVLPAVNKQQNPFDT
MTPEPVTEPKPMMSSSDNTGVWQSAAGLFAVLWILSSGLAIHFYRKRKITAIATVDSESDKNSQAWPDNHPALEKLCQGN
KNGVKDARMLYPAILAWQQRYPEKENETFKTHLQALKAHLYHQADLPPDTLSALCDDIARLSAQQPKSSKKTGKHLDPLY
PNEVDA

Sequences:

>Translated_566_residues
MLSQTMDRNTKQQHWLTKLILITLALILILLLSTQVFAKSVTVKIDHQSVEMGDIISVVIKTDFQTFETPDFSGLKDQFD
ILGTQRSSQIEIINGNYQSYSRWDLRLTPKQIGDLVIPPLTIGGVMSEPHIIKVTENKMVPGVEKGSSFLESSINLTSPY
VQQEVLFTLRFYHLGQFINGNIRPPTFHQAITENIRNQFHYQKNVNGRLYDVYEWTWAFYPQKSGPMVIPPQSFNGRIQY
RGQLKAVKDQTQSIELKVLPKPKSYPTNSAWLPAKEVTLKDDLQTSTPVRVGDSITRTLSLKAEGLLASQLPEFQFKDQA
GFHVYPDKATNNNQKTEQGMLSQKLQKIAIVPTRAGHVTLPAITVSWWNTQTNQLETQTLAEKTIRVLPAVNKQQNPFDT
MTPEPVTEPKPMMSSSDNTGVWQSAAGLFAVLWILSSGLAIHFYRKRKITAIATVDSESDKNSQAWPDNHPALEKLCQGN
KNGVKDARMLYPAILAWQQRYPEKENETFKTHLQALKAHLYHQADLPPDTLSALCDDIARLSAQQPKSSKKTGKHLDPLY
PNEVDA
>Mature_566_residues
MLSQTMDRNTKQQHWLTKLILITLALILILLLSTQVFAKSVTVKIDHQSVEMGDIISVVIKTDFQTFETPDFSGLKDQFD
ILGTQRSSQIEIINGNYQSYSRWDLRLTPKQIGDLVIPPLTIGGVMSEPHIIKVTENKMVPGVEKGSSFLESSINLTSPY
VQQEVLFTLRFYHLGQFINGNIRPPTFHQAITENIRNQFHYQKNVNGRLYDVYEWTWAFYPQKSGPMVIPPQSFNGRIQY
RGQLKAVKDQTQSIELKVLPKPKSYPTNSAWLPAKEVTLKDDLQTSTPVRVGDSITRTLSLKAEGLLASQLPEFQFKDQA
GFHVYPDKATNNNQKTEQGMLSQKLQKIAIVPTRAGHVTLPAITVSWWNTQTNQLETQTLAEKTIRVLPAVNKQQNPFDT
MTPEPVTEPKPMMSSSDNTGVWQSAAGLFAVLWILSSGLAIHFYRKRKITAIATVDSESDKNSQAWPDNHPALEKLCQGN
KNGVKDARMLYPAILAWQQRYPEKENETFKTHLQALKAHLYHQADLPPDTLSALCDDIARLSAQQPKSSKKTGKHLDPLY
PNEVDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63919; Mature: 63919

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQTMDRNTKQQHWLTKLILITLALILILLLSTQVFAKSVTVKIDHQSVEMGDIISVVI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHH
KTDFQTFETPDFSGLKDQFDILGTQRSSQIEIINGNYQSYSRWDLRLTPKQIGDLVIPPL
HCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHCCEECCCE
TIGGVMSEPHIIKVTENKMVPGVEKGSSFLESSINLTSPYVQQEVLFTLRFYHLGQFING
EECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NIRPPTFHQAITENIRNQFHYQKNVNGRLYDVYEWTWAFYPQKSGPMVIPPQSFNGRIQY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCEEEE
RGQLKAVKDQTQSIELKVLPKPKSYPTNSAWLPAKEVTLKDDLQTSTPVRVGDSITRTLS
CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHEEE
LKAEGLLASQLPEFQFKDQAGFHVYPDKATNNNQKTEQGMLSQKLQKIAIVPTRAGHVTL
ECCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEE
PAITVSWWNTQTNQLETQTLAEKTIRVLPAVNKQQNPFDTMTPEPVTEPKPMMSSSDNTG
EEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VWQSAAGLFAVLWILSSGLAIHFYRKRKITAIATVDSESDKNSQAWPDNHPALEKLCQGN
HHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCC
KNGVKDARMLYPAILAWQQRYPEKENETFKTHLQALKAHLYHQADLPPDTLSALCDDIAR
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LSAQQPKSSKKTGKHLDPLYPNEVDA
HHCCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSQTMDRNTKQQHWLTKLILITLALILILLLSTQVFAKSVTVKIDHQSVEMGDIISVVI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHH
KTDFQTFETPDFSGLKDQFDILGTQRSSQIEIINGNYQSYSRWDLRLTPKQIGDLVIPPL
HCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHCCEECCCE
TIGGVMSEPHIIKVTENKMVPGVEKGSSFLESSINLTSPYVQQEVLFTLRFYHLGQFING
EECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NIRPPTFHQAITENIRNQFHYQKNVNGRLYDVYEWTWAFYPQKSGPMVIPPQSFNGRIQY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCEEEE
RGQLKAVKDQTQSIELKVLPKPKSYPTNSAWLPAKEVTLKDDLQTSTPVRVGDSITRTLS
CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHEEE
LKAEGLLASQLPEFQFKDQAGFHVYPDKATNNNQKTEQGMLSQKLQKIAIVPTRAGHVTL
ECCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEE
PAITVSWWNTQTNQLETQTLAEKTIRVLPAVNKQQNPFDTMTPEPVTEPKPMMSSSDNTG
EEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VWQSAAGLFAVLWILSSGLAIHFYRKRKITAIATVDSESDKNSQAWPDNHPALEKLCQGN
HHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCC
KNGVKDARMLYPAILAWQQRYPEKENETFKTHLQALKAHLYHQADLPPDTLSALCDDIAR
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LSAQQPKSSKKTGKHLDPLYPNEVDA
HHCCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA